Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184376
Identifier: 159184376
GI number: 159184376
Start: 568556
End: 568924
Strand: Direct
Name: 159184376
Synonym: Atu0585
Alternate gene names: NA
Gene position: 568556-568924 (Clockwise)
Preceding gene: 159184375
Following gene: 15887931
Centisome position: 20.01
GC content: 55.83
Gene sequence:
>369_bases ATGGACCTTATGTCGAACGACCACCGTATCCAATCCGTTCTCGGCCGCCTCGAGATGATCATCGACAATGAGAACGACAA TATCGGTAAGGACCCGCAGTTCGACTTCAAGGTCTCCAATGCCCATAAGAGCCGTTGCCTTTATGAACTGACGATGCTGG TCCGCGATACACCGCACGAAGATATCGCCGCCGGTTACATGGAGCAGGTGAAGGGCATCAAGTCCAAGCTCGCCACCAAT GCCACCCGCGTCGAGGCGCATCTGAACGCGGTTCGCGCTGTCGCGGATCTGCTCAAGAACGCTATTCAGGAAGCCGATAC GGACGGCACCTATTCCCAGGAACAATTCCTTTACGGCGCAGCCTCCTGA
Upstream 100 bases:
>100_bases CAATTCGGATGGTGGCGGAGTTCGAGCGGCAGGTCCTCGGCGTTTCCAATGATAAAACGGACGAGGCTTGAGAATGAAAA ACCTTAACGAGGAGACAAGC
Downstream 100 bases:
>100_bases TGTTGAAGCTTCTTCTCACCGGCGTCTGGGTTTGCGCCGTCACGCTCGGCGCGGTGTATTTCTCCGTCCAGATGGCGACG GCGCCGGCGCCGGATGAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MDLMSNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAAGYMEQVKGIKSKLATN ATRVEAHLNAVRAVADLLKNAIQEADTDGTYSQEQFLYGAAS
Sequences:
>Translated_122_residues MDLMSNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAAGYMEQVKGIKSKLATN ATRVEAHLNAVRAVADLLKNAIQEADTDGTYSQEQFLYGAAS >Mature_122_residues MDLMSNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAAGYMEQVKGIKSKLATN ATRVEAHLNAVRAVADLLKNAIQEADTDGTYSQEQFLYGAAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13642; Mature: 13642
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLMSNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCH DIAAGYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTYSQEQFLYGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC AS CC >Mature Secondary Structure MDLMSNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHE CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHCCCCH DIAAGYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTYSQEQFLYGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCC AS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA