Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184371
Identifier: 159184371
GI number: 159184371
Start: 557435
End: 557878
Strand: Direct
Name: 159184371
Synonym: Atu0572
Alternate gene names: NA
Gene position: 557435-557878 (Clockwise)
Preceding gene: 15887916
Following gene: 15887918
Centisome position: 19.62
GC content: 56.98
Gene sequence:
>444_bases GTGCCGGAAGGAATTCTCTATTCCGTCGGCCTGACCGAGACGGGCCGCAAGGGGCGTCTCGACCCCAATGCCATGAATAT TGAGGGAAAACCGGTATTTGCGGCCTCTACGGAGGAGGCGATGGTGACTTTCGAGGCGGCGAAACGCAACGGCGCCAAGC TGATCGACCTCGGATGCATGCAAATAAACCATTATTTCCACGGCGAAAACTTCACCTCCGCGCGGGAAATGTTCGATCCG CGCCGCAATGTCGAATATGCCGCCATGTTCCTGCGCAATCTCCACAACAGGCATGAAACCTGGACAATGGCAGTCGCGCG CTATCACGCCGGCCCGAATAATGACCCCGCGCAGAAGAAATATGTCTGCCGCGTCATCGCCAATCTCGTGGCGACGGGGT ACGGGAAATGGACTGCCAACGCGAAAAACTTTTGCGACGGATAG
Upstream 100 bases:
>100_bases TCTTCTGCTGACAATGGCGTCTACCTCTGAAAACGCGTCGGCTTCGGCAACATCAGGTGTCTGTGAAAGAGAGATCCAGT CGGCCGCCCGCAAATATGGC
Downstream 100 bases:
>100_bases CAACCTGAAATTGTCTTTCAAGGTCGCAGGACTCGTAATTTGAAATGTGGCGATAGATTGATCGAAAAAAGGCGCCGCAA GCTGTTTTTTTGGGTTTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: Transglycosylase Slt Family; Transglycosylase; Soluble Lytic Murein Transglycosylase; Slt Family Transglycosylase; Signal Peptide; Transglycosylase SLT Domain; Transglycosylase SLT Domain-Containing Protein; Lytic Transglycosylase; VirB1 Protein; Lytic Murein Transglycosylase Family Protein
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MPEGILYSVGLTETGRKGRLDPNAMNIEGKPVFAASTEEAMVTFEAAKRNGAKLIDLGCMQINHYFHGENFTSAREMFDP RRNVEYAAMFLRNLHNRHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVATGYGKWTANAKNFCDG
Sequences:
>Translated_147_residues MPEGILYSVGLTETGRKGRLDPNAMNIEGKPVFAASTEEAMVTFEAAKRNGAKLIDLGCMQINHYFHGENFTSAREMFDP RRNVEYAAMFLRNLHNRHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVATGYGKWTANAKNFCDG >Mature_146_residues PEGILYSVGLTETGRKGRLDPNAMNIEGKPVFAASTEEAMVTFEAAKRNGAKLIDLGCMQINHYFHGENFTSAREMFDPR RNVEYAAMFLRNLHNRHETWTMAVARYHAGPNNDPAQKKYVCRVIANLVATGYGKWTANAKNFCDG
Specific function: Unknown
COG id: COG0741
COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16489; Mature: 16358
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEGILYSVGLTETGRKGRLDPNAMNIEGKPVFAASTEEAMVTFEAAKRNGAKLIDLGCM CCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEEEEHHE QINHYFHGENFTSAREMFDPRRNVEYAAMFLRNLHNRHETWTMAVARYHAGPNNDPAQKK EEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH YVCRVIANLVATGYGKWTANAKNFCDG HHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PEGILYSVGLTETGRKGRLDPNAMNIEGKPVFAASTEEAMVTFEAAKRNGAKLIDLGCM CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEHHHCCCCEEEEEHHE QINHYFHGENFTSAREMFDPRRNVEYAAMFLRNLHNRHETWTMAVARYHAGPNNDPAQKK EEEEEECCCCCCHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHH YVCRVIANLVATGYGKWTANAKNFCDG HHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA