Click here to switch to the map view.

The map label for this gene is ftcR [H]

Identifier: 15887918

GI number: 15887918

Start: 558161

End: 558832

Strand: Direct

Name: ftcR [H]

Synonym: Atu0573

Alternate gene names: 15887918

Gene position: 558161-558832 (Clockwise)

Preceding gene: 159184371

Following gene: 15887919

Centisome position: 19.64

GC content: 59.38

Gene sequence:

>672_bases
ATGATCGTAGTGGTTGATGAGCGCGAGCTCGTTAAAGACGGCTATACATCTCTATTTGGGCGTGAGGGCATCCCCTCGAC
CGGGTTCGATCCGGTTGAGTTCGGGGAATGGGTCTCGACGGCGGCAGACAGCGATCTGGCGGCCGTGGAGGCCTTCCTGA
TCGGCCAGGGCGACCGGAGCTTTTCGTTGCCGAAGGCGATCAGGGATCGCACGACGGCACCTGTCATCGCGGTCAGCGAC
CAGCCCTCGCTGGAAGCAACGCTCGCGCTGTTCGACAGCGGCGTCGATGATGTCGTGCGCAAGCCGGTTCACCCCCGTGA
AATCCTTGCGCGTGCGGCGGCCATCCGCCGCCGGCTGCAGGTCATCTCGAACTTCACCGATGCAGGACCGATCCGGGTTT
TCTCCGATGGTCGCGATCCTGAAGTTTGCGGCGAAGTCTTTGCCTTGCCGCGCCGCGAGCGTCGCATCCTTGAATATCTG
ATTGCCAATCGCGGACGTCGCGTTTCCAAGTCGCAGATTTTCAATGCCATCTACGGCATCTTCGATGATGACGTCGAAGA
AAACGTCGTTGAAAGCCACATCAGCAAGCTGCGCAAGAAGCTGCGCAAGAAGCTTGGCTACGATCCGGTCGATTCCAAGC
GGTTCCTCGGCTACAGCATTGATTGGCAATGA

Upstream 100 bases:

>100_bases
TTATTAATAACTATCGATGATTTCCTACAGTTGTTCGTGAATCCCCCGATTCGTACCAATGCCTCATTGGAAAACACCAC
ACTGATTCGGAGGCGGACGA

Downstream 100 bases:

>100_bases
TTTTCATTGACCCGCGTGGTCTTTTTCAAACGCGGTATTTCAGACAGCTTCACGCAAGCCAAACGCTTTACCTTCTCCCT
GAAAGATGACCACGAGGGTT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MIVVVDERELVKDGYTSLFGREGIPSTGFDPVEFGEWVSTAADSDLAAVEAFLIGQGDRSFSLPKAIRDRTTAPVIAVSD
QPSLEATLALFDSGVDDVVRKPVHPREILARAAAIRRRLQVISNFTDAGPIRVFSDGRDPEVCGEVFALPRRERRILEYL
IANRGRRVSKSQIFNAIYGIFDDDVEENVVESHISKLRKKLRKKLGYDPVDSKRFLGYSIDWQ

Sequences:

>Translated_223_residues
MIVVVDERELVKDGYTSLFGREGIPSTGFDPVEFGEWVSTAADSDLAAVEAFLIGQGDRSFSLPKAIRDRTTAPVIAVSD
QPSLEATLALFDSGVDDVVRKPVHPREILARAAAIRRRLQVISNFTDAGPIRVFSDGRDPEVCGEVFALPRRERRILEYL
IANRGRRVSKSQIFNAIYGIFDDDVEENVVESHISKLRKKLRKKLGYDPVDSKRFLGYSIDWQ
>Mature_223_residues
MIVVVDERELVKDGYTSLFGREGIPSTGFDPVEFGEWVSTAADSDLAAVEAFLIGQGDRSFSLPKAIRDRTTAPVIAVSD
QPSLEATLALFDSGVDDVVRKPVHPREILARAAAIRRRLQVISNFTDAGPIRVFSDGRDPEVCGEVFALPRRERRILEYL
IANRGRRVSKSQIFNAIYGIFDDDVEENVVESHISKLRKKLRKKLGYDPVDSKRFLGYSIDWQ

Specific function: Required for transcription of flagellar genes [H]

COG id: COG0745

COG function: function code TK; Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789402, Length=221, Percent_Identity=26.2443438914027, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1787375, Length=150, Percent_Identity=28, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 24998; Mature: 24998

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVVDERELVKDGYTSLFGREGIPSTGFDPVEFGEWVSTAADSDLAAVEAFLIGQGDRS
CEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
FSLPKAIRDRTTAPVIAVSDQPSLEATLALFDSGVDDVVRKPVHPREILARAAAIRRRLQ
CCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH
VISNFTDAGPIRVFSDGRDPEVCGEVFALPRRERRILEYLIANRGRRVSKSQIFNAIYGI
HHHCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FDDDVEENVVESHISKLRKKLRKKLGYDPVDSKRFLGYSIDWQ
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC
>Mature Secondary Structure
MIVVVDERELVKDGYTSLFGREGIPSTGFDPVEFGEWVSTAADSDLAAVEAFLIGQGDRS
CEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
FSLPKAIRDRTTAPVIAVSDQPSLEATLALFDSGVDDVVRKPVHPREILARAAAIRRRLQ
CCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHH
VISNFTDAGPIRVFSDGRDPEVCGEVFALPRRERRILEYLIANRGRRVSKSQIFNAIYGI
HHHCCCCCCCEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
FDDDVEENVVESHISKLRKKLRKKLGYDPVDSKRFLGYSIDWQ
HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA