Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is wzxC [C]
Identifier: 159184330
GI number: 159184330
Start: 468531
End: 469733
Strand: Reverse
Name: wzxC [C]
Synonym: Atu0480
Alternate gene names: 159184330
Gene position: 469733-468531 (Counterclockwise)
Preceding gene: 15887830
Following gene: 159184328
Centisome position: 16.53
GC content: 60.02
Gene sequence:
>1203_bases ATGTCCAGCGCTGCCCAGCTCCTGACCTTCGCGCTGCTTGCCCGCCATCTCGGAGTCGAACAATTCGCGCTTTACGCTTC GATCACGGCCGTCACCAATCTCGGCGTGCAGATCTGCGGCATCGGCTCGCAGGAATCGCTGATCCGCCGCGTCGCACAGG ATCGTAGCATGTTTCCCGTCATGCTCGGCCACAGCTATCTCCTAAGTGCTGCGACGGGCGTGGTGCTGACAATCATCGGC ATGGTGACGATCCCGGTGTTTTTCCCGACCTCGGAAACATTGCTGCACACGCTGATCACCACCTTCCTGATCCTGTTCAC CAACCTCGTTCTCCTGAAGGTCATCTCACTTTCCACTCAGAGTTTTATCGCCCATTCCAACTTCGCTTCGGCCAACAAGC TGGAAGTGATGTTCGCCGTCACCCGCACCATTGCCGCGGTGGTCGCCTGCCTCATCTTCAAGGTGGAAACGGTTGAGGCC TGGGCACTGTGGAACCTCGCCGCCCACGCCGTTGCGGCCGTGATTTCCGTCAAGGCGACCGGCAGGCTCGGTCGGCCGAT TTTCCGGATCGTGCGCGAGGAAATCCGCATCGGCATCCTGTTTTCCACCCAGTTCCTGTTCAAGGCCGTGCGCGGCAATG CTGATATTCTCGTTCTCGGCGCCATTGCCAGCGCCGAGGTGCTGGGCAGCTATTCGATCGCCCGGCGCATTCTCGACAGT TCCTATCTTTCCGTCGAGGCGCTCAACCGGCTGATCTATCCGGGCTCCGCCTCCGCCGCCCTGCAGGGCATCACCAAGAC CATAGGGCGCGCTTATAATGTGCTGAAGGCAGCACTTTTCATCGCAACCGGCAGCGCGTTGGTGATCTTCATCATCGCCC CTTTCCTGCCGCTGCTGTTCGGCGACGAATATGTCTCTCTGCCCATCATTACCCGCGTGCTTTGCTGGGTGGTTCTGCCG ATGGCCGTTGCCGCCACCGCACTCGAGGCGCTTGGCGCCTCCGGGAGGCAGGATATTCGCGCGAAGATATGGAACAGCGG CAATCTCCTCGGCTCCGTCATCGTTGCCTTCTTTACCTGGTCCTTCAGCATTTCGGGAACGATCGGCAGCTATTTCCTGG TGGAAACCGCCATCGCCGCCGCCGTATGGATCGCGCTCCTACGTTTGCGGCGCGATGAACAGGTTTTCGCGCCAGCCAAA TAG
Upstream 100 bases:
>100_bases GCCGGAAAAAATGGAGAATGAGGTGTCGTTCAACACGCCGCGGTTCGGCCATCTAGTCAGACTGGGATTGACCTATATGG CGTCCGGCGGGGCGCTGCTG
Downstream 100 bases:
>100_bases GACTGTCGCGACGGTCGATCAGGATTTCTAATAAAGCCCGTAAGGGAAATAACGCCGGTAAATCTCTTCCAGCCGGCCAT TTCGCGAAAGGGCGGCCAGC
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Cell-Surface Polysaccharide Exporter Protein PST Family; Polysaccharide Biosynthesis Membrane Protein
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSSAAQLLTFALLARHLGVEQFALYASITAVTNLGVQICGIGSQESLIRRVAQDRSMFPVMLGHSYLLSAATGVVLTIIG MVTIPVFFPTSETLLHTLITTFLILFTNLVLLKVISLSTQSFIAHSNFASANKLEVMFAVTRTIAAVVACLIFKVETVEA WALWNLAAHAVAAVISVKATGRLGRPIFRIVREEIRIGILFSTQFLFKAVRGNADILVLGAIASAEVLGSYSIARRILDS SYLSVEALNRLIYPGSASAALQGITKTIGRAYNVLKAALFIATGSALVIFIIAPFLPLLFGDEYVSLPIITRVLCWVVLP MAVAATALEALGASGRQDIRAKIWNSGNLLGSVIVAFFTWSFSISGTIGSYFLVETAIAAAVWIALLRLRRDEQVFAPAK
Sequences:
>Translated_400_residues MSSAAQLLTFALLARHLGVEQFALYASITAVTNLGVQICGIGSQESLIRRVAQDRSMFPVMLGHSYLLSAATGVVLTIIG MVTIPVFFPTSETLLHTLITTFLILFTNLVLLKVISLSTQSFIAHSNFASANKLEVMFAVTRTIAAVVACLIFKVETVEA WALWNLAAHAVAAVISVKATGRLGRPIFRIVREEIRIGILFSTQFLFKAVRGNADILVLGAIASAEVLGSYSIARRILDS SYLSVEALNRLIYPGSASAALQGITKTIGRAYNVLKAALFIATGSALVIFIIAPFLPLLFGDEYVSLPIITRVLCWVVLP MAVAATALEALGASGRQDIRAKIWNSGNLLGSVIVAFFTWSFSISGTIGSYFLVETAIAAAVWIALLRLRRDEQVFAPAK >Mature_399_residues SSAAQLLTFALLARHLGVEQFALYASITAVTNLGVQICGIGSQESLIRRVAQDRSMFPVMLGHSYLLSAATGVVLTIIGM VTIPVFFPTSETLLHTLITTFLILFTNLVLLKVISLSTQSFIAHSNFASANKLEVMFAVTRTIAAVVACLIFKVETVEAW ALWNLAAHAVAAVISVKATGRLGRPIFRIVREEIRIGILFSTQFLFKAVRGNADILVLGAIASAEVLGSYSIARRILDSS YLSVEALNRLIYPGSASAALQGITKTIGRAYNVLKAALFIATGSALVIFIIAPFLPLLFGDEYVSLPIITRVLCWVVLPM AVAATALEALGASGRQDIRAKIWNSGNLLGSVIVAFFTWSFSISGTIGSYFLVETAIAAAVWIALLRLRRDEQVFAPAK
Specific function: Lipopolysaccharide biosynthesis. [C]
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43011; Mature: 42880
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSAAQLLTFALLARHLGVEQFALYASITAVTNLGVQICGIGSQESLIRRVAQDRSMFPV CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCHH MLGHSYLLSAATGVVLTIIGMVTIPVFFPTSETLLHTLITTFLILFTNLVLLKVISLSTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFIAHSNFASANKLEVMFAVTRTIAAVVACLIFKVETVEAWALWNLAAHAVAAVISVKAT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRLGRPIFRIVREEIRIGILFSTQFLFKAVRGNADILVLGAIASAEVLGSYSIARRILDS CCCCHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHH SYLSVEALNRLIYPGSASAALQGITKTIGRAYNVLKAALFIATGSALVIFIIAPFLPLLF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GDEYVSLPIITRVLCWVVLPMAVAATALEALGASGRQDIRAKIWNSGNLLGSVIVAFFTW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHH SFSISGTIGSYFLVETAIAAAVWIALLRLRRDEQVFAPAK HEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SSAAQLLTFALLARHLGVEQFALYASITAVTNLGVQICGIGSQESLIRRVAQDRSMFPV CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHCCCCCHH MLGHSYLLSAATGVVLTIIGMVTIPVFFPTSETLLHTLITTFLILFTNLVLLKVISLSTQ HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SFIAHSNFASANKLEVMFAVTRTIAAVVACLIFKVETVEAWALWNLAAHAVAAVISVKAT HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GRLGRPIFRIVREEIRIGILFSTQFLFKAVRGNADILVLGAIASAEVLGSYSIARRILDS CCCCHHHHHHHHHHHHEEEEEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHH SYLSVEALNRLIYPGSASAALQGITKTIGRAYNVLKAALFIATGSALVIFIIAPFLPLLF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GDEYVSLPIITRVLCWVVLPMAVAATALEALGASGRQDIRAKIWNSGNLLGSVIVAFFTW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHHHH SFSISGTIGSYFLVETAIAAAVWIALLRLRRDEQVFAPAK HEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA