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The map label for this gene is ydaM [H]

Identifier: 159184328

GI number: 159184328

Start: 465635

End: 467182

Strand: Reverse

Name: ydaM [H]

Synonym: Atu0478

Alternate gene names: 159184328

Gene position: 467182-465635 (Counterclockwise)

Preceding gene: 159184330

Following gene: 159184325

Centisome position: 16.44

GC content: 59.95

Gene sequence:

>1548_bases
ATGGGGTTGCTGATCGTGCCGGAGCTGGCGCGGCTGGATCTGCTCACAAACATATTGGATGAGCTTCCGCATCTTTTTGA
CGAACTTGCCGTGACCACCCCGCAGGCCATGCGCGACGCGATCTGGAAAGCCGGCGAGGCCCGTCGCCTGGCGGAAACCC
GGCAGCGGCTTTTCAACGCCGCGCCCCAGCATTCCGCCAAAATCACACTGCATGGCCAGCAGGGTTTTTATGGCGGCGTC
CTCGCCACCCTGCTCGTCCTTTCGCTGCTGACTTATTCTGAAATAGCCCTAGCCTGGCTTCACGCCACCCTGTCGATGCT
CTACCTCAACACCCTGCTGTTCCGGCTCTTTGCCCTCATCCATATACCCCGGGAAACCGACGTGGAAACGGCCTTGTCTC
TTCGGCACGAAAACGAACTGCCGGTTTATACAATTCTGGTGGCGCTTTACCGCGAAGAGGCTGTCATCGAGCAGCTCGTC
AGTGCTTTGGAGCGTCTGGACTGGCCCCGCTCGCGGCTCGATATCAAGCTCGTCTGCGAGGCCGACGATGGCGCGACGAT
CGAAGCGATCCGGCGGATAAATCCCGGTCCGCACATGGAGATCGTCCAGGTACCACCTTCCGAGCCGCGCACCAAACCCA
AAGCCCTCACCTACGCACTTTCCGGTGCGCGCGGTACATTCGTTGTCGTTTATGATGCCGAGGACCGGCCCCATCCGCAG
CAATTGCGCGAAGCCTATGCCGCCTTCCGCAACCAGCCGGAGGATATGGCCTGCGTACAGGCGCCGCTTATCATCAGCAA
CGCCTCTTCTTCCTGGCTCAGCGCCTGTTTCGCACTGGAATACGCAGGCCTGTTCCGCTGCATGCTGCCCGCCCTCGCCA
CCCATGGGCTGCCGCTGCCGCTTGGCGGCACCTCCAATCATTTCCGGACTGCCGCGCTGCGGCGGGCCGGCGCCTGGGAT
CCCTACAATGTCACGGAAGATGCCGATCTTGGCCTCAGGCTGCATCGGCTCGGCTATCGCTGCGGCGTCATCCGGCGCCA
GACTCTGGAGGATGCACCGACATCTCTGCCCGTGTGGCTGAACCAGCGAACACGCTGGTTCAAGGGCTGGCTGCAAAGTT
GGCTGGTGATGACCCGTACACCTTTTGCAACCGCGCGTACCATGGGATGGTTTGCCTATATGACCTTTCAGCTGCTGATC
GGCGGCATGCTTCTGTCGTCTCTGACGCATCCCTTGCTCTTCGTTTCCCTGGTATTCATGGCCATAGCCATCCGGGAAAA
CGGTGTCGACCTGCTCTTCAGATGGCAGGGGGCGCTGTTTTTTATCGATGCGCTGAATATCGTCGGAAGTTACACGATCT
TCGTACTGATGGGCCGCAGCAGAATGATAGCTTATGAAAGACGGCAGGTCGGAAGGCGATGGCTGGCGATGCCCTTATAT
TGGCTGATGCTATCCGTCGCGGCCTGGCGGGCTGTGGTGGAGCTTAAAACCAGACCTTTCGTCTGGAACAAGACGCCGCA
TGTGCCGGTCGCCAAAGACAAGACCTGA

Upstream 100 bases:

>100_bases
TCTCCCGGAAATCGCGTCGGAACGGGTAGCGAATTTAGATAATCTCGATCTTCAGCTCACAGAGCCGAGGTTGCTGCGGC
TGATCCCACAGGACGGCAAA

Downstream 100 bases:

>100_bases
CGCGCATTCGCGACAGAGGCCAAACGGCATAACGCATCTCTCGGTCAGCAAAAAAGGCATCCCGCCGTTTTAGCCGATGA
TAACCGAACACGAAGCCCGT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 515; Mature: 514

Protein sequence:

>515_residues
MGLLIVPELARLDLLTNILDELPHLFDELAVTTPQAMRDAIWKAGEARRLAETRQRLFNAAPQHSAKITLHGQQGFYGGV
LATLLVLSLLTYSEIALAWLHATLSMLYLNTLLFRLFALIHIPRETDVETALSLRHENELPVYTILVALYREEAVIEQLV
SALERLDWPRSRLDIKLVCEADDGATIEAIRRINPGPHMEIVQVPPSEPRTKPKALTYALSGARGTFVVVYDAEDRPHPQ
QLREAYAAFRNQPEDMACVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLPLGGTSNHFRTAALRRAGAWD
PYNVTEDADLGLRLHRLGYRCGVIRRQTLEDAPTSLPVWLNQRTRWFKGWLQSWLVMTRTPFATARTMGWFAYMTFQLLI
GGMLLSSLTHPLLFVSLVFMAIAIRENGVDLLFRWQGALFFIDALNIVGSYTIFVLMGRSRMIAYERRQVGRRWLAMPLY
WLMLSVAAWRAVVELKTRPFVWNKTPHVPVAKDKT

Sequences:

>Translated_515_residues
MGLLIVPELARLDLLTNILDELPHLFDELAVTTPQAMRDAIWKAGEARRLAETRQRLFNAAPQHSAKITLHGQQGFYGGV
LATLLVLSLLTYSEIALAWLHATLSMLYLNTLLFRLFALIHIPRETDVETALSLRHENELPVYTILVALYREEAVIEQLV
SALERLDWPRSRLDIKLVCEADDGATIEAIRRINPGPHMEIVQVPPSEPRTKPKALTYALSGARGTFVVVYDAEDRPHPQ
QLREAYAAFRNQPEDMACVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLPLGGTSNHFRTAALRRAGAWD
PYNVTEDADLGLRLHRLGYRCGVIRRQTLEDAPTSLPVWLNQRTRWFKGWLQSWLVMTRTPFATARTMGWFAYMTFQLLI
GGMLLSSLTHPLLFVSLVFMAIAIRENGVDLLFRWQGALFFIDALNIVGSYTIFVLMGRSRMIAYERRQVGRRWLAMPLY
WLMLSVAAWRAVVELKTRPFVWNKTPHVPVAKDKT
>Mature_514_residues
GLLIVPELARLDLLTNILDELPHLFDELAVTTPQAMRDAIWKAGEARRLAETRQRLFNAAPQHSAKITLHGQQGFYGGVL
ATLLVLSLLTYSEIALAWLHATLSMLYLNTLLFRLFALIHIPRETDVETALSLRHENELPVYTILVALYREEAVIEQLVS
ALERLDWPRSRLDIKLVCEADDGATIEAIRRINPGPHMEIVQVPPSEPRTKPKALTYALSGARGTFVVVYDAEDRPHPQQ
LREAYAAFRNQPEDMACVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLPLGGTSNHFRTAALRRAGAWDP
YNVTEDADLGLRLHRLGYRCGVIRRQTLEDAPTSLPVWLNQRTRWFKGWLQSWLVMTRTPFATARTMGWFAYMTFQLLIG
GMLLSSLTHPLLFVSLVFMAIAIRENGVDLLFRWQGALFFIDALNIVGSYTIFVLMGRSRMIAYERRQVGRRWLAMPLYW
LMLSVAAWRAVVELKTRPFVWNKTPHVPVAKDKT

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 58340; Mature: 58209

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLIVPELARLDLLTNILDELPHLFDELAVTTPQAMRDAIWKAGEARRLAETRQRLFNA
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
APQHSAKITLHGQQGFYGGVLATLLVLSLLTYSEIALAWLHATLSMLYLNTLLFRLFALI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPRETDVETALSLRHENELPVYTILVALYREEAVIEQLVSALERLDWPRSRLDIKLVCE
HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADDGATIEAIRRINPGPHMEIVQVPPSEPRTKPKALTYALSGARGTFVVVYDAEDRPHPQ
CCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCHH
QLREAYAAFRNQPEDMACVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLP
HHHHHHHHHHCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LGGTSNHFRTAALRRAGAWDPYNVTEDADLGLRLHRLGYRCGVIRRQTLEDAPTSLPVWL
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
NQRTRWFKGWLQSWLVMTRTPFATARTMGWFAYMTFQLLIGGMLLSSLTHPLLFVSLVFM
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAIRENGVDLLFRWQGALFFIDALNIVGSYTIFVLMGRSRMIAYERRQVGRRWLAMPLY
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
WLMLSVAAWRAVVELKTRPFVWNKTPHVPVAKDKT
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GLLIVPELARLDLLTNILDELPHLFDELAVTTPQAMRDAIWKAGEARRLAETRQRLFNA
CEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
APQHSAKITLHGQQGFYGGVLATLLVLSLLTYSEIALAWLHATLSMLYLNTLLFRLFALI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HIPRETDVETALSLRHENELPVYTILVALYREEAVIEQLVSALERLDWPRSRLDIKLVCE
HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
ADDGATIEAIRRINPGPHMEIVQVPPSEPRTKPKALTYALSGARGTFVVVYDAEDRPHPQ
CCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCHHEEEEECCCCCEEEEEECCCCCCCHH
QLREAYAAFRNQPEDMACVQAPLIISNASSSWLSACFALEYAGLFRCMLPALATHGLPLP
HHHHHHHHHHCCCCHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LGGTSNHFRTAALRRAGAWDPYNVTEDADLGLRLHRLGYRCGVIRRQTLEDAPTSLPVWL
CCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
NQRTRWFKGWLQSWLVMTRTPFATARTMGWFAYMTFQLLIGGMLLSSLTHPLLFVSLVFM
CHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIAIRENGVDLLFRWQGALFFIDALNIVGSYTIFVLMGRSRMIAYERRQVGRRWLAMPLY
HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHH
WLMLSVAAWRAVVELKTRPFVWNKTPHVPVAKDKT
HHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]