Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184315

Identifier: 159184315

GI number: 159184315

Start: 456537

End: 457178

Strand: Direct

Name: 159184315

Synonym: Atu0462

Alternate gene names: NA

Gene position: 456537-457178 (Clockwise)

Preceding gene: 159184314

Following gene: 159184317

Centisome position: 16.07

GC content: 60.12

Gene sequence:

>642_bases
ATGGGTTACGTGCTTTCCCAACGCAGCCTTGCGCGCCTTGACGGCGTGCATCCTGACCTCGTGCGTGTTGTCCGGCGCGC
CATCCAGATCACCGAGATTGATTTCGTGGTGACCGAAGGTGTGCGGACGTTGGAAAAACAGAAGGACATGGTTGCGCGCG
GCGCTTCCAAGACCATGAACAGCCGACATTTGAAGGCTGCGAACGGTTACAGTCATGCGGTCGATCTGGCGGCGCTGGTC
GGCGGAAGCGTGGTTTGGGACTGGCCGCTTTATGCCAAGCTCGCGAAGGCCATGAAACAGGCGGCAAAGGAACTCGGCAT
TCCGCTGGAATGGGGCGGTGACTGGAAGTCCTTTAAGGATGGCCCCCACTTCCAGTTGCCGTGGAAACAATACCCTTCGG
CGGGGCCTGTCGCTGGCAAGAAATATACCGCCGAAACCGAGACGCAGGCCAAGTCCAAGGCGCTGGCGATCTTGGGCGGT
GGCGTCAGCACCGCCGTTCCGGTTGGACAGGAACCTTTGACGAAGGCTGTTGAGGTCGTCTCGGCGCAGCAGGGCGAGCT
TTCCTCCGGGGAATGGGCGCGAATGGCAATCGCCGTCTTCATCGTCGGTATCTCCGTCTATCTTGCGTGGCGGAAACTCT
GA

Upstream 100 bases:

>100_bases
GCCACGCCATCCTCTTTCCTGACCCCGCGCCGCTTCGGGCGGACGGACGAGAACTAACCGGCTTCCTGCCGACAATCCCC
CTGAAAACTTGGAGACTATA

Downstream 100 bases:

>100_bases
TGCGGATTTTTGACGCTGCATTGATCGGGGGCGGCATCGTTATCGGTGCCGCTCTCATGGCTGCGCCCGCCTACTTTGTC
GGCAAGGGGGCAGGAAAAGC

Product: endolysin

Products: NA

Alternate protein names: Phage Endolysin; Phage-Related Protein; Bacteriophage P7 Related Protein; Phagelysin; Phage Protein; Phage Capsid Scaffolding Protein; Peptidase

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MGYVLSQRSLARLDGVHPDLVRVVRRAIQITEIDFVVTEGVRTLEKQKDMVARGASKTMNSRHLKAANGYSHAVDLAALV
GGSVVWDWPLYAKLAKAMKQAAKELGIPLEWGGDWKSFKDGPHFQLPWKQYPSAGPVAGKKYTAETETQAKSKALAILGG
GVSTAVPVGQEPLTKAVEVVSAQQGELSSGEWARMAIAVFIVGISVYLAWRKL

Sequences:

>Translated_213_residues
MGYVLSQRSLARLDGVHPDLVRVVRRAIQITEIDFVVTEGVRTLEKQKDMVARGASKTMNSRHLKAANGYSHAVDLAALV
GGSVVWDWPLYAKLAKAMKQAAKELGIPLEWGGDWKSFKDGPHFQLPWKQYPSAGPVAGKKYTAETETQAKSKALAILGG
GVSTAVPVGQEPLTKAVEVVSAQQGELSSGEWARMAIAVFIVGISVYLAWRKL
>Mature_212_residues
GYVLSQRSLARLDGVHPDLVRVVRRAIQITEIDFVVTEGVRTLEKQKDMVARGASKTMNSRHLKAANGYSHAVDLAALVG
GSVVWDWPLYAKLAKAMKQAAKELGIPLEWGGDWKSFKDGPHFQLPWKQYPSAGPVAGKKYTAETETQAKSKALAILGGG
VSTAVPVGQEPLTKAVEVVSAQQGELSSGEWARMAIAVFIVGISVYLAWRKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23084; Mature: 22953

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYVLSQRSLARLDGVHPDLVRVVRRAIQITEIDFVVTEGVRTLEKQKDMVARGASKTMN
CCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
SRHLKAANGYSHAVDLAALVGGSVVWDWPLYAKLAKAMKQAAKELGIPLEWGGDWKSFKD
CCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GPHFQLPWKQYPSAGPVAGKKYTAETETQAKSKALAILGGGVSTAVPVGQEPLTKAVEVV
CCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHCCCCCCHHHHHHHHHH
SAQQGELSSGEWARMAIAVFIVGISVYLAWRKL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GYVLSQRSLARLDGVHPDLVRVVRRAIQITEIDFVVTEGVRTLEKQKDMVARGASKTMN
CCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHC
SRHLKAANGYSHAVDLAALVGGSVVWDWPLYAKLAKAMKQAAKELGIPLEWGGDWKSFKD
CCCCCCCCCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
GPHFQLPWKQYPSAGPVAGKKYTAETETQAKSKALAILGGGVSTAVPVGQEPLTKAVEVV
CCCEECCHHHCCCCCCCCCCCCCCCHHHHHHHHEEEEECCCCHHCCCCCCHHHHHHHHHH
SAQQGELSSGEWARMAIAVFIVGISVYLAWRKL
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA