Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184312
Identifier: 159184312
GI number: 159184312
Start: 452511
End: 454250
Strand: Direct
Name: 159184312
Synonym: Atu0457
Alternate gene names: NA
Gene position: 452511-454250 (Clockwise)
Preceding gene: 15887808
Following gene: 15887811
Centisome position: 15.92
GC content: 60.06
Gene sequence:
>1740_bases GTGACCACCATTTTCAACGAGGGCGGTTCGTGGTGCATCGTCAACCGCGTCCCCGAAAGCGCCGATGCCGCAACCCTGCA GAATAACCTTATCGGCGATCCTGTGGCTAGAACTGGCCTGTATGCGGCGCTTCGCGCTAAGGCGATTACGAGCTACCAGC CCCGCGTCCTTATTACCGCAGGCGATACAGGCGCATGGATTGAGGGCGGCGTGGTTTCGGTATCTCTGACTTCCGAAGGC GACAATCTGACGGAGGTGCCTGACGTGACGGCGACGGGTGGCGGCGCTGACCCCGGCAAGGTATTGCCGACACTTAAGGC AATTATGGGGACCGGCCCGAACGCCAAGAAGGTGGTTGGAGTTGAGGTCGTCGCTCCCGGTAAGAAAATGTCGGCGGCTC CGCTCTTGACCTTCACGGGTGGCGGAGCCGATGCGGGTAAGGTTCTGCCTGCCGCCACTGCCAATGTCGGCGACGTGGCG AACCCGTTCGTTTCGGCGCTCAACGCCATCACCCCGAAAATCCGCGCTCGCGCTTACATCACTGGACCGAATACGACCGA TGCGGAAGCATTGCGGTTCCGCAAAACCGTCAATGGCGGGCGCATCCTGATCATCGATCCGAAGACGATCAAGAACGTAA ACGGGGTTCCGGTGACGAAGCCGGTGGCACCTGTCTTCGCTGGCGTCCGTTCCCGCGTGGTGGCATCGGCGGAAGGCTTC TCCGGTTCGGTCTCGAACAAGATTATTCGCACCATCGACGGTGTTGCGCGCACGATCGCCTATACCGGCGGCATGAAGGA ATTCATGAACGATCTCGGCGACCTGTTGCTTGGTCCTGTCGATCCGAACGCCGCCGACCGCATTGGGGCAATTTTCATGC GGGCGAAAGAGTGGGGCGCATCGATCCGCGAATTGAACGATGCGATAAAGGACAATCCTATCGCCAAGTTTTTTGCGGAA ATGTCCGGTTACGGCTTCCAGCTTTTTGCGTGGGGCATGGGTATTTCCATGTTGGCTGGCACCATTCGCAAGCTCGCGGC GGCGCTGTTTGTGCTTTCTGGGGCGAGCACCTTGCTTGGGGCGTTGAAAACTGTCGGTTCAATCGCGGCCATTGTTGGCG GCGGCGCTGTAGCGGGTGGTGCCGCTGCGGGGGCTGGAACTGGTTCGGCGGGTGCGGCGGCAGGTGGAGCGGCGACGGCT GGTTTGCTCGGGCGATGGGGTTCGATCATTACCGGCCTAGCCCGCATAGGCACCTATGGAACCGCTGGCGCTGGCCTTTG GGAAATGGGCAAGGCCACCTATACTGGTGACACCTTTTACAAGCAGGGAAAAGCGTGGCTCCCCGGCCCGGAAGACTTGC TTCACGCGGTCGGAAGTTATTTCGCGTCATCCCCGCCTTCAACCGCGCTTCCAGCTTCTGCATCGGCGCAGTTGTCGTTG GATGCAGCGCGTTCGGCTCGGGCTGCGGGCTTTGGCGGGTCTACCGACAACCTGCCGGGCAAAACTATGGATGATTTAGG CATTCGAACGGTTCGGATTGACTCGTCATCTCTCGCCCAAATGGACCGGCCCTCCGGCACGCAAGACGTGCGGGTAGTTA ATCCGCAGCGCCCGGATATCACGATCCATGCGCCGATTACGATAACAGGGGTCGTCGATCCGCGTGCCGCTGCGTCTGCG GCAATCAGCGAGATTTCGAATGCACTAGCTCCGAACCTCGAAGGTTCATTCAGTGATTAA
Upstream 100 bases:
>100_bases CGACGCCGACCCCGCCGCGTTTCCGCTGAATTATCCTACCATCGTTCGGTCATTGCCGCAGGCGGCGGCGCTCGGCGCGG CTGGCACCCTGTTGGAAGAT
Downstream 100 bases:
>100_bases GGTTTAGCTTCGTAAACCACCCACCACTGTTCGCCCTCTTCGTATGCGCGGTAGCTGATCGGGGCTTTCTGACCGTTGGC AAGCATCCCTGTGCCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein FI
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MTTIFNEGGSWCIVNRVPESADAATLQNNLIGDPVARTGLYAALRAKAITSYQPRVLITAGDTGAWIEGGVVSVSLTSEG DNLTEVPDVTATGGGADPGKVLPTLKAIMGTGPNAKKVVGVEVVAPGKKMSAAPLLTFTGGGADAGKVLPAATANVGDVA NPFVSALNAITPKIRARAYITGPNTTDAEALRFRKTVNGGRILIIDPKTIKNVNGVPVTKPVAPVFAGVRSRVVASAEGF SGSVSNKIIRTIDGVARTIAYTGGMKEFMNDLGDLLLGPVDPNAADRIGAIFMRAKEWGASIRELNDAIKDNPIAKFFAE MSGYGFQLFAWGMGISMLAGTIRKLAAALFVLSGASTLLGALKTVGSIAAIVGGGAVAGGAAAGAGTGSAGAAAGGAATA GLLGRWGSIITGLARIGTYGTAGAGLWEMGKATYTGDTFYKQGKAWLPGPEDLLHAVGSYFASSPPSTALPASASAQLSL DAARSARAAGFGGSTDNLPGKTMDDLGIRTVRIDSSSLAQMDRPSGTQDVRVVNPQRPDITIHAPITITGVVDPRAAASA AISEISNALAPNLEGSFSD
Sequences:
>Translated_579_residues MTTIFNEGGSWCIVNRVPESADAATLQNNLIGDPVARTGLYAALRAKAITSYQPRVLITAGDTGAWIEGGVVSVSLTSEG DNLTEVPDVTATGGGADPGKVLPTLKAIMGTGPNAKKVVGVEVVAPGKKMSAAPLLTFTGGGADAGKVLPAATANVGDVA NPFVSALNAITPKIRARAYITGPNTTDAEALRFRKTVNGGRILIIDPKTIKNVNGVPVTKPVAPVFAGVRSRVVASAEGF SGSVSNKIIRTIDGVARTIAYTGGMKEFMNDLGDLLLGPVDPNAADRIGAIFMRAKEWGASIRELNDAIKDNPIAKFFAE MSGYGFQLFAWGMGISMLAGTIRKLAAALFVLSGASTLLGALKTVGSIAAIVGGGAVAGGAAAGAGTGSAGAAAGGAATA GLLGRWGSIITGLARIGTYGTAGAGLWEMGKATYTGDTFYKQGKAWLPGPEDLLHAVGSYFASSPPSTALPASASAQLSL DAARSARAAGFGGSTDNLPGKTMDDLGIRTVRIDSSSLAQMDRPSGTQDVRVVNPQRPDITIHAPITITGVVDPRAAASA AISEISNALAPNLEGSFSD >Mature_578_residues TTIFNEGGSWCIVNRVPESADAATLQNNLIGDPVARTGLYAALRAKAITSYQPRVLITAGDTGAWIEGGVVSVSLTSEGD NLTEVPDVTATGGGADPGKVLPTLKAIMGTGPNAKKVVGVEVVAPGKKMSAAPLLTFTGGGADAGKVLPAATANVGDVAN PFVSALNAITPKIRARAYITGPNTTDAEALRFRKTVNGGRILIIDPKTIKNVNGVPVTKPVAPVFAGVRSRVVASAEGFS GSVSNKIIRTIDGVARTIAYTGGMKEFMNDLGDLLLGPVDPNAADRIGAIFMRAKEWGASIRELNDAIKDNPIAKFFAEM SGYGFQLFAWGMGISMLAGTIRKLAAALFVLSGASTLLGALKTVGSIAAIVGGGAVAGGAAAGAGTGSAGAAAGGAATAG LLGRWGSIITGLARIGTYGTAGAGLWEMGKATYTGDTFYKQGKAWLPGPEDLLHAVGSYFASSPPSTALPASASAQLSLD AARSARAAGFGGSTDNLPGKTMDDLGIRTVRIDSSSLAQMDRPSGTQDVRVVNPQRPDITIHAPITITGVVDPRAAASAA ISEISNALAPNLEGSFSD
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58592; Mature: 58461
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIFNEGGSWCIVNRVPESADAATLQNNLIGDPVARTGLYAALRAKAITSYQPRVLITA CCEEECCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE GDTGAWIEGGVVSVSLTSEGDNLTEVPDVTATGGGADPGKVLPTLKAIMGTGPNAKKVVG CCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE VEVVAPGKKMSAAPLLTFTGGGADAGKVLPAATANVGDVANPFVSALNAITPKIRARAYI EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE TGPNTTDAEALRFRKTVNGGRILIIDPKTIKNVNGVPVTKPVAPVFAGVRSRVVASAEGF ECCCCCCHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC SGSVSNKIIRTIDGVARTIAYTGGMKEFMNDLGDLLLGPVDPNAADRIGAIFMRAKEWGA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCH SIRELNDAIKDNPIAKFFAEMSGYGFQLFAWGMGISMLAGTIRKLAAALFVLSGASTLLG HHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH ALKTVGSIAAIVGGGAVAGGAAAGAGTGSAGAAAGGAATAGLLGRWGSIITGLARIGTYG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TAGAGLWEMGKATYTGDTFYKQGKAWLPGPEDLLHAVGSYFASSPPSTALPASASAQLSL CCCCCHHHCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEH DAARSARAAGFGGSTDNLPGKTMDDLGIRTVRIDSSSLAQMDRPSGTQDVRVVNPQRPDI HHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHCCCCCCCCCEEEECCCCCCE TIHAPITITGVVDPRAAASAAISEISNALAPNLEGSFSD EEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TTIFNEGGSWCIVNRVPESADAATLQNNLIGDPVARTGLYAALRAKAITSYQPRVLITA CEEECCCCCEEEEECCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEE GDTGAWIEGGVVSVSLTSEGDNLTEVPDVTATGGGADPGKVLPTLKAIMGTGPNAKKVVG CCCCCEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEE VEVVAPGKKMSAAPLLTFTGGGADAGKVLPAATANVGDVANPFVSALNAITPKIRARAYI EEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE TGPNTTDAEALRFRKTVNGGRILIIDPKTIKNVNGVPVTKPVAPVFAGVRSRVVASAEGF ECCCCCCHHHHHHHHCCCCCEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC SGSVSNKIIRTIDGVARTIAYTGGMKEFMNDLGDLLLGPVDPNAADRIGAIFMRAKEWGA CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHCH SIRELNDAIKDNPIAKFFAEMSGYGFQLFAWGMGISMLAGTIRKLAAALFVLSGASTLLG HHHHHHHHHCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH ALKTVGSIAAIVGGGAVAGGAAAGAGTGSAGAAAGGAATAGLLGRWGSIITGLARIGTYG HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC TAGAGLWEMGKATYTGDTFYKQGKAWLPGPEDLLHAVGSYFASSPPSTALPASASAQLSL CCCCCHHHCCCEEECCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEH DAARSARAAGFGGSTDNLPGKTMDDLGIRTVRIDSSSLAQMDRPSGTQDVRVVNPQRPDI HHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCHHHHHCCCCCCCCCEEEECCCCCCE TIHAPITITGVVDPRAAASAAISEISNALAPNLEGSFSD EEECCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA