Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184267
Identifier: 159184267
GI number: 159184267
Start: 335817
End: 336698
Strand: Direct
Name: 159184267
Synonym: Atu0344
Alternate gene names: NA
Gene position: 335817-336698 (Clockwise)
Preceding gene: 159184266
Following gene: 159184268
Centisome position: 11.82
GC content: 57.71
Gene sequence:
>882_bases ATGGTTGCCGAAATCTTCAATCACGACATTTGTGAAAACAATGTTGTCATTAGTCCTCGTTCCGAGACAGCTCAGGACAA TGAGGGTCTTTTCGGCCGTATCGGCACGCTGGAAACACGGCTTGCCAGAAATGAACGTGAAATCGATGCCGCGCAATCCG TGCGCTACCGGGTCTTTGTCGAGGAAATGAAGGCGCGCCTTCCTGCCGAAGCGATGCGCCGCAAGCGCGACTTCGACGCC TGGGACAGCGTCTGCGACCACCTTCTTGTGCTCGACAAGTCGATTGAAGGCGATAGCGAGGACCAGATCGTCGGCACCTA TCGTCTGCTGCGACAGGAAACGGCGCTTGCCAATAATGGTTTCTATTCTGCCAGCGAGTTCGATATTGCCGGGCTTGTCG CGCGCCATCCGGGCAAGCGCTTCATGGAACTTGGCCGTTCCTGTGTGCTGCCGGAATATCGCACCAAGCGTACCGTCGAG CTTCTGTGGCAGGGCAACTGGGCTTATGCCGTAAAACACCGCATGGACGCCATGATCGGCTGCGCTTCCTTCCCCGGCGT GCAGCCGGAAGCACATGCGCTGGCGCTGTCCTTCCTGCACCATAATTGCCTTGCAAAGGGCGAGTGGGAAGCGGTCGCTT TGCCCGAACTCTATCATGAAATGGACCTCGTGCCGGTCGAGGCGCTCAATACCCGCAAGGCATTGAATGCCATGCCGCCG CTGATCAAGGGTTATATGCGTCTTGGCGCCATGTTCGGCTCCGGCGCGGTCGTTGATCATGCTTTCAACACCACCGACGT CCTGGTGGTTTTGCCGGTATCGTCCATCGCCGGCCGCTATATCAGCTATTATGGCGGCGAGGCCGAACGCATCAACGGCT GA
Upstream 100 bases:
>100_bases TCATAACTTGACAGACTCGCGTTGGCGGCATTTTGTCACTATTCTGTCGCGAATTAGTGATTTATGACAGGAAAACTCTT TGGTGGCGGAGCGATTCCCC
Downstream 100 bases:
>100_bases CCGGGTTTTGATCGAGGCCATCAGGATGTTCCTGTGGGCAGCGGTGCCGCGTGTGTTGTGTTGGGGCGGGCAATGCCGCT AGTGTCGGCGCTCCTTTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: Hemolysin; Hemolysin-Like Protein; Ornithine-Acyl(Acyl Carrier Protein) N-Acyltransferase; Phospholipid/Glycerol Acyltransferase; Ornithine-Acyl(Acyl Carrier Protein) N- Acyltransferase; Ornithine-Acyl N-Acyltransferase; Phosphohistidine Phosphatase SixA; Acyltransferase Domain Protein; Hemolysin Protein; Acyl-CoA N-Acyltransferase; Acyl-CoA N-Acyltransferases Superfamily Protein; Nudix Hydrolase
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFVEEMKARLPAEAMRRKRDFDA WDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNGFYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVE LLWQGNWAYAVKHRMDAMIGCASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPP LIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING
Sequences:
>Translated_293_residues MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFVEEMKARLPAEAMRRKRDFDA WDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNGFYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVE LLWQGNWAYAVKHRMDAMIGCASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPP LIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING >Mature_293_residues MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFVEEMKARLPAEAMRRKRDFDA WDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNGFYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVE LLWQGNWAYAVKHRMDAMIGCASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPP LIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING
Specific function: Unknown
COG id: COG3176
COG function: function code R; Putative hemolysin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32806; Mature: 32806
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFV CCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHH EEMKARLPAEAMRRKRDFDAWDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNG HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC FYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVELLWQGNWAYAVKHRMDAMIG CCCCCCCCHHHHHHHCCCHHHHHCCHHCCCCCHHCCCEEEEEEECCCHHHHHHHHHHHHH CASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPP HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCH LIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING HHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MVAEIFNHDICENNVVISPRSETAQDNEGLFGRIGTLETRLARNEREIDAAQSVRYRVFV CCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEHHHHHHHHHCCHHHHHHHHHHHHHHHH EEMKARLPAEAMRRKRDFDAWDSVCDHLLVLDKSIEGDSEDQIVGTYRLLRQETALANNG HHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCC FYSASEFDIAGLVARHPGKRFMELGRSCVLPEYRTKRTVELLWQGNWAYAVKHRMDAMIG CCCCCCCCHHHHHHHCCCHHHHHCCHHCCCCCHHCCCEEEEEEECCCHHHHHHHHHHHHH CASFPGVQPEAHALALSFLHHNCLAKGEWEAVALPELYHEMDLVPVEALNTRKALNAMPP HCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHCCH LIKGYMRLGAMFGSGAVVDHAFNTTDVLVVLPVSSIAGRYISYYGGEAERING HHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA