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The map label for this gene is comM [H]

Identifier: 159184251

GI number: 159184251

Start: 303448

End: 304980

Strand: Direct

Name: comM [H]

Synonym: Atu0311

Alternate gene names: 159184251

Gene position: 303448-304980 (Clockwise)

Preceding gene: 159184250

Following gene: 15887665

Centisome position: 10.68

GC content: 64.06

Gene sequence:

>1533_bases
ATGGTGGCACGGGTCAATACGGTTGCGTTTCAGGGCATAGAGGGCGTGCCCGTCGAGGTGCAGGTGATGGTCGCACCCGG
CAAGATCGGCATCCAGATTGTCGGCCTGCCGGACAAGGCGGTGGCTGAAAGCCGCGAGCGGGTGCAGGCCGCCCTGCACG
CCTCGGGTCTGGCCTTGCCGGCAAAAAAAGTCACCGTCAATCTGGCGCCTGCCGATTTGCCGAAGGAAGGATCGCATTTC
GATCTTCCCATCGCTCTCGGTCTCATGGCTGCTCTGGGGGCCATACCGGCGGAAGCGCTCAGCCAATATGTGGTTCTCGG
TGAACTCAATCTTGATGGCACGATTGGTACGGTTTCTGGTGCGCTTCCGGCGGCCATCGGTGCCAATGCGCTCGGCAAGG
GCTTGATCTGTCCGGCTGAAAGCGGGCCGGAAGCGGCCTGGGCCGGCGCCGGCATCGATATTCTCGCCCCGCGCAGCCTC
ATTGCGCTCGCCAATCATTTTCGCGGCACCCAGCTTCTGTCGCGCCCCACACCCGCCATCCGCGCCAATCCGGTCAATCT
GCCGGATCTGGCCGATATCAAGGGACAGGAAAGCGCGCGGCGCGCTATGGAGGTCGCGGCCGCCGGCGGCCATAATCTGC
TGATGGTCGGGCCGCCCGGTTCTGGCAAATCGATGCTCGCCGCTCGGCTGCCTTCCATCCTGCCGCCGCTGGAGGTGGCG
GAACTGCTGGAAGTGTCGATGGTGCATTCCATTGCCGGCCAATTATCGGGCGGCAAGCTCTCGGACCGCAGACCGTTCCG
CACACCGCACCATTCCGCCACCATGGCGGCGCTGATCGGCGGCGGGTTGCGCGCCAGACCGGGTGAGGCCTCGCTTGCCC
ATCACGGCGTCCTGTTTCTGGATGAATTCCCGGAATTTTCGCCGCAGGTGCTGGATGCGCTGCGCCAGCCGCTGGAAACT
GGCGAATGCATCATCGCAAGGGCCAATCATCGCGTCAGTTATCCCGCCGAAATTCAGCTCGTGGCTGCCATGAACCCCTG
CCGCTGCGGCATGGCGGGAGAGCCGGGCTTCACCTGTGCCAGAGGTCCGCGTTGTGTAACCGATTATCAGTCCCGCATTT
CAGGTCCGCTGCTGGATCGCATCGATATTCGCATCGACGTTCCCGCCGTTTCCGCGACCGATCTCATCCGACCCGTCGTA
TCCGAGCCGAGTGCGGTGGTTGCCGCCCGGGTCGCACGGGCCCGCCTTGCCCAGCAGGAACGTTATGCGGCGGCGGGGTT
TCCTGCCATCCGCACCAATGCCCGCTGTACAACGACGCTGATCGAAAAATATGCCGAACCGGATGCATCCGGGCTGCAAT
TGCTGCGCGACGCCGCCGAGCGGCTGAAGTTTTCCGCGCGCGGTTATCATCGCATTCTCAAGGTCGCCCGCACGCTCGCC
GATCTGGATGGTAAGCAGACGGTTGGCCGCATCCATGTGGCGGAAGCCGTGTCCTACCGCATCGCGGGGGAAAGGCTGAC
GGTCGCCGCTTAG

Upstream 100 bases:

>100_bases
GGTGTTCTTGTTTTATTCTTTGCGCTGTGGCACGTTGCTTGCGAGTGGCCGCCATGGAACATGAAGTTCCGATGATGCGG
CCGGTTTGCGGGGGCAGGCC

Downstream 100 bases:

>100_bases
AAAGTTGATCTTCGGGCCTTAACCGCAAAAAAACGATGTGCCGCCAGCGGGGCGGGCGGCACATCGGGATATCAATTGAC
CGGTGCATAAGCACCGTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 510

Protein sequence:

>510_residues
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALPAKKVTVNLAPADLPKEGSHF
DLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSGALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSL
IALANHFRGTQLLSRPTPAIRANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFLDEFPEFSPQVLDALRQPLET
GECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCARGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVV
SEPSAVVAARVARARLAQQERYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA

Sequences:

>Translated_510_residues
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALPAKKVTVNLAPADLPKEGSHF
DLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSGALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSL
IALANHFRGTQLLSRPTPAIRANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFLDEFPEFSPQVLDALRQPLET
GECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCARGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVV
SEPSAVVAARVARARLAQQERYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA
>Mature_510_residues
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALPAKKVTVNLAPADLPKEGSHF
DLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSGALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSL
IALANHFRGTQLLSRPTPAIRANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFLDEFPEFSPQVLDALRQPLET
GECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCARGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVV
SEPSAVVAARVARARLAQQERYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA

Specific function: Induced during competence development. Not needed for DNA uptake. May be involved in a recombination step [H]

COG id: COG0606

COG function: function code O; Predicted ATPase with chaperone activity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mg-chelatase subunits D/I family. ComM subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693202, Length=505, Percent_Identity=41.3861386138614, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR001208
- InterPro:   IPR004482
- InterPro:   IPR000523
- InterPro:   IPR020568 [H]

Pfam domain/function: PF01078 Mg_chelatase [H]

EC number: NA

Molecular weight: Translated: 53366; Mature: 53366

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALP
CCEEEEEHEECCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
AKKVTVNLAPADLPKEGSHFDLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSG
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCC
ALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSLIALANHFRGTQLLSRPTPAI
CHHHHHCHHHCCCCCCCCCCCCCCCEECCCCEEEECCHHHHHHHHHCCCCHHHCCCCCCC
RANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHH
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCEEEE
DEFPEFSPQVLDALRQPLETGECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCA
ECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
RGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVVSEPSAVVAARVARARLAQQE
CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
HHHHCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA
HCCCCHHHHHEEHHHHHHHEECCCEEEEEC
>Mature Secondary Structure
MVARVNTVAFQGIEGVPVEVQVMVAPGKIGIQIVGLPDKAVAESRERVQAALHASGLALP
CCEEEEEHEECCCCCCCEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCC
AKKVTVNLAPADLPKEGSHFDLPIALGLMAALGAIPAEALSQYVVLGELNLDGTIGTVSG
CEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHCCEEEEEECCCCCCCCCCCC
ALPAAIGANALGKGLICPAESGPEAAWAGAGIDILAPRSLIALANHFRGTQLLSRPTPAI
CHHHHHCHHHCCCCCCCCCCCCCCCEECCCCEEEECCHHHHHHHHHCCCCHHHCCCCCCC
RANPVNLPDLADIKGQESARRAMEVAAAGGHNLLMVGPPGSGKSMLAARLPSILPPLEVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHH
ELLEVSMVHSIAGQLSGGKLSDRRPFRTPHHSATMAALIGGGLRARPGEASLAHHGVLFL
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHCCEEEE
DEFPEFSPQVLDALRQPLETGECIIARANHRVSYPAEIQLVAAMNPCRCGMAGEPGFTCA
ECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCC
RGPRCVTDYQSRISGPLLDRIDIRIDVPAVSATDLIRPVVSEPSAVVAARVARARLAQQE
CCCCHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
RYAAAGFPAIRTNARCTTTLIEKYAEPDASGLQLLRDAAERLKFSARGYHRILKVARTLA
HHHHCCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLDGKQTVGRIHVAEAVSYRIAGERLTVAA
HCCCCHHHHHEEHHHHHHHEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 9457884 [H]