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The map label for this gene is ctpE

Identifier: 159184217

GI number: 159184217

Start: 225744

End: 226325

Strand: Reverse

Name: ctpE

Synonym: Atu0220

Alternate gene names: NA

Gene position: 226325-225744 (Counterclockwise)

Preceding gene: 15887573

Following gene: 159184216

Centisome position: 7.96

GC content: 59.11

Gene sequence:

>582_bases
ATGACCACCAACGCCATTCCCGACGATTATCGCACGCGCCACCCTATCACCTTGTCGGAAGCCGAGCATTCGCTTGATAT
TCCGGTTTCGGCAGGCGACAGCCGGTTGACCACGGCCATGGCAGACAATGTCCGTGGTTTCGCCCAGAATTATGCGTCGA
TGTCGACGGGTATCGTCAACATTCAGATGCCTTCGGGATCGCCCAATTCCGCAACGGCAGCGAGAATGGCGAAACAGATT
CGCTCCACGCTTTCCGGCGCGGGTGTGGCTCAAGGCAAGATCATGGAAACGCGCTATGCCGCTTCTCCGAATGGCGACTC
CGCTCCCATCCGCCTGAGCTATGTCGCCGTTACCGCGATGACCGGCCAATGCGGCCAGTGGCCTGAGGATCTTTCGGACA
ATACCTTCGCAAACAAGAACTGGTACAACTTCGGATGCGCCTCACAGAGCAATCTGGCAGCGCAGATCGCCAATCCCATG
GATCTGGTCGGCCCGCGCGGCATGAGCCCAATTGATGCCGAACGCCGGGCGGTGGTCATCGACACCTATCGCAGCGGTAC
TGCGACGGCACCGACAAACTGA

Upstream 100 bases:

>100_bases
CTCTTCCACCTTTTCCCTCCAGCTGCCCGGAAGAAGGGCTGGCCTCATCGCCGTTGCCGCGCTTGCTGCCGGCCTGCTGC
AGGGCTGCGCACGCGACCCA

Downstream 100 bases:

>100_bases
TGCAGGTCCACCATTTCTCACGGCAGGAAAAACGATGAGCGCTGTAGAATACGACATCAAGCTGAGCGGCGGCGCGGAAG
CCGAACCGCCGCTGCGCGCT

Product: components of type IV pilus

Products: NA

Alternate protein names: Pilus Assembly Protein CpaD; Pilus Assembly Protein; Type IV Pili Component-Like; Components Of Type IV Pilus; Type IV Pili Component-Like Protein; Component Of Type IV Pilus

Number of amino acids: Translated: 193; Mature: 192

Protein sequence:

>193_residues
MTTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVNIQMPSGSPNSATAARMAKQI
RSTLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAMTGQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPM
DLVGPRGMSPIDAERRAVVIDTYRSGTATAPTN

Sequences:

>Translated_193_residues
MTTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVNIQMPSGSPNSATAARMAKQI
RSTLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAMTGQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPM
DLVGPRGMSPIDAERRAVVIDTYRSGTATAPTN
>Mature_192_residues
TTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVNIQMPSGSPNSATAARMAKQIR
STLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAMTGQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPMD
LVGPRGMSPIDAERRAVVIDTYRSGTATAPTN

Specific function: Unknown

COG id: COG5461

COG function: function code N; Type IV pili component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20450; Mature: 20319

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVN
CCCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
IQMPSGSPNSATAARMAKQIRSTLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAM
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEE
TGQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPMDLVGPRGMSPIDAERRAVVI
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCEEEE
DTYRSGTATAPTN
EECCCCCCCCCCC
>Mature Secondary Structure 
TTNAIPDDYRTRHPITLSEAEHSLDIPVSAGDSRLTTAMADNVRGFAQNYASMSTGIVN
CCCCCCCCCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
IQMPSGSPNSATAARMAKQIRSTLSGAGVAQGKIMETRYAASPNGDSAPIRLSYVAVTAM
EEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEE
TGQCGQWPEDLSDNTFANKNWYNFGCASQSNLAAQIANPMDLVGPRGMSPIDAERRAVVI
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHCCCHHHCCCCCCCCCCCCCCEEEE
DTYRSGTATAPTN
EECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA