Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is glk
Identifier: 159184201
GI number: 159184201
Start: 186737
End: 187759
Strand: Reverse
Name: glk
Synonym: Atu0184
Alternate gene names: 159184201
Gene position: 187759-186737 (Counterclockwise)
Preceding gene: 15887539
Following gene: 159184200
Centisome position: 6.61
GC content: 61.39
Gene sequence:
>1023_bases ATGCCGAAGACGTCCGATACCGAATATCTGTCCTTTCCGATCCTTCTTGGCGACATCGGCGGCACCAATGCCCGCTTTTC CATCCTGATCGATTCCTTTGCTGAACCGGTGCACCTCACCACGGTGAAGACGGCGGAATATCCTGGTATCGATGACGCGA TCCAGCAGGCGGTTCTGGACAAGACCTCTCTTCAGCCGGTCTCGACCATTCTTGCAATTGCCGGCCCGATCGAAGGCGAC GAGATTCCGTTGACCAACTGCCACTGGGTCGTCAAGCCGAAGGACATGCTGGCCAAGCTCGGCCTGAAGGACGTCATCGT CATCAACGACTTTGAGGCGCAGGCTCTGGCGATTGCGGCTCTTGACGACGACAACCGGGAGCCTATCGGCTCCGGTAAAA AGGACATGCTGGCGTCGCGCGTCGTTCTTGGACCGGGCACGGGGCTTGGCGTCGCCGGGCTGGTCTATGCCCGCCATATG TGGTTTCCGGTGCCTGGCGAAGGCGGGCATATCGATATCGGCCCGAGAAGCGCGCGCGACTATGTGGTTTTCCCCCATAT CGAAACCATCGAGGGCCGCGTCGCCGGCGAACAGATCCTGTGCGGACGCGGGCTGGTCAATCTTTATCGGGCCATCTGCA AAGCCGACGGCATCGAGCCTGTCTTTTCCGATCCGGCCGACATCACCTCGCAGGGGCTTTCGGGCCAGAACGCGCAGGCA AAAGAAACGCTGTCGCTGTTCAGCACCTATCTCGGCCGCGTGGCGGGCGACCTTGCGCTGATCTTCATGGCCAAGGGCGG CGTTTATCTGGCCGGCGGTATTTCGCAGAAGATCATCCCTGCGCTGAAGAGCCCGGAATTCCGGGCGGCGTTCGAAGACA AGGCGCCGCACAGCGCTCTGATGCGGACCATTCCGACATTCGTCGTCACCCATCCTCAGGCGGCCCTTTCCGGCCTCGCC ACCTATGCGAGAACGCCTGCCGATTTCGGTCTTGCGCTGGACGGGCGGCGCTGGAGGGCTTGA
Upstream 100 bases:
>100_bases GGTCTACGACATTCCCATGGCGCTCAACCGCGCCACCGCAGAAAACCTCATCGACTTCAATTCCGCCGACTGACCCGAAC CCACCACAATGGAACAGGCA
Downstream 100 bases:
>100_bases TCGCTCTCCTCTCAAAGGGGGCTATCCTTCCTATGTGATGCTTGCGAAGCGGGCGGGCGATCTTTAACGTCGCTGCTGCA AACATCAATCGACCGATACC
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MPKTSDTEYLSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVLDKTSLQPVSTILAIAGPIEGD EIPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAALDDDNREPIGSGKKDMLASRVVLGPGTGLGVAGLVYARHM WFPVPGEGGHIDIGPRSARDYVVFPHIETIEGRVAGEQILCGRGLVNLYRAICKADGIEPVFSDPADITSQGLSGQNAQA KETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAFEDKAPHSALMRTIPTFVVTHPQAALSGLA TYARTPADFGLALDGRRWRA
Sequences:
>Translated_340_residues MPKTSDTEYLSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVLDKTSLQPVSTILAIAGPIEGD EIPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAALDDDNREPIGSGKKDMLASRVVLGPGTGLGVAGLVYARHM WFPVPGEGGHIDIGPRSARDYVVFPHIETIEGRVAGEQILCGRGLVNLYRAICKADGIEPVFSDPADITSQGLSGQNAQA KETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAFEDKAPHSALMRTIPTFVVTHPQAALSGLA TYARTPADFGLALDGRRWRA >Mature_339_residues PKTSDTEYLSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVLDKTSLQPVSTILAIAGPIEGDE IPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAALDDDNREPIGSGKKDMLASRVVLGPGTGLGVAGLVYARHMW FPVPGEGGHIDIGPRSARDYVVFPHIETIEGRVAGEQILCGRGLVNLYRAICKADGIEPVFSDPADITSQGLSGQNAQAK ETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAFEDKAPHSALMRTIPTFVVTHPQAALSGLAT YARTPADFGLALDGRRWRA
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial glucokinase family
Homologues:
Organism=Escherichia coli, GI1788732, Length=310, Percent_Identity=36.4516129032258, Blast_Score=200, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLK_AGRT5 (Q8UIV7)
Other databases:
- EMBL: AE007869 - PIR: AB2599 - PIR: C97381 - RefSeq: NP_353219.2 - STRING: Q8UIV7 - GeneID: 1132222 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0184 - eggNOG: COG0837 - HOGENOM: HBG644410 - OMA: LGMTRLK - PhylomeDB: Q8UIV7 - ProtClustDB: PRK00292 - BioCyc: ATUM176299-1:ATU0184-MONOMER - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00524 - InterPro: IPR003836 - TIGRFAMs: TIGR00749
Pfam domain/function: PF02685 Glucokinase
EC number: =2.7.1.2
Molecular weight: Translated: 36244; Mature: 36113
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTSDTEYLSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVLD CCCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHH KTSLQPVSTILAIAGPIEGDEIPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAA HCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCEEEEEE LDDDNREPIGSGKKDMLASRVVLGPGTGLGVAGLVYARHMWFPVPGEGGHIDIGPRSARD ECCCCCCCCCCCHHHHHHHEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEECCCCCCCC YVVFPHIETIEGRVAGEQILCGRGLVNLYRAICKADGIEPVFSDPADITSQGLSGQNAQA EEEECCHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHH KETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAFEDKAPHSAL HHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHH MRTIPTFVVTHPQAALSGLATYARTPADFGLALDGRRWRA HHHHHHHEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCC >Mature Secondary Structure PKTSDTEYLSFPILLGDIGGTNARFSILIDSFAEPVHLTTVKTAEYPGIDDAIQQAVLD CCCCCCCEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHH KTSLQPVSTILAIAGPIEGDEIPLTNCHWVVKPKDMLAKLGLKDVIVINDFEAQALAIAA HCCCCHHHHHHHHCCCCCCCCCCCCCCEEEECCHHHHHHCCCCEEEEEECCCCCEEEEEE LDDDNREPIGSGKKDMLASRVVLGPGTGLGVAGLVYARHMWFPVPGEGGHIDIGPRSARD ECCCCCCCCCCCHHHHHHHEEEECCCCCCHHHHHHHHHHHEECCCCCCCEEECCCCCCCC YVVFPHIETIEGRVAGEQILCGRGLVNLYRAICKADGIEPVFSDPADITSQGLSGQNAQA EEEECCHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHH KETLSLFSTYLGRVAGDLALIFMAKGGVYLAGGISQKIIPALKSPEFRAAFEDKAPHSAL HHHHHHHHHHHHHHHHHEEEEEEECCCEEEECCCCHHHHHHHCCCCCCCCCCCCCCHHHH MRTIPTFVVTHPQAALSGLATYARTPADFGLALDGRRWRA HHHHHHHEEECCHHHHHHHHHHHCCCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194