Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is phnE [H]
Identifier: 159184196
GI number: 159184196
Start: 176435
End: 177421
Strand: Reverse
Name: phnE [H]
Synonym: Atu0172
Alternate gene names: 159184196
Gene position: 177421-176435 (Counterclockwise)
Preceding gene: 15887527
Following gene: 15887525
Centisome position: 6.24
GC content: 58.56
Gene sequence:
>987_bases ATGGCGACCACACTGCACAATGGTACCCTATCACCCGAGGGGTTGAGCGCATCGTCCCGGACGGTCATGCGCCATTATCA ACAGCAGCTTGCGACACGACGGATCTATACCGTCATTTCGCTCGTGATCTTTCTCGTCATCCTCGCCGCCTCCCTGAATT TCGCCAATGCGGCCAATTCAGGCAAGTTCTTCGAGCGCCTGCCCTATTTCTTCGATTTCATGAAGACCTTCGTGCCTGAC AGTCCGCTGGAAATCTTCCGGGCGATGTTCGACCTGCCGTCGCCTTATGCGGACGGTTCGCTGAAATATAATTATGTCGC CGATCGCGTTTACATCACCGACGGTTTCTACATCCCGCACTTCATCTACCAGCTGATCATCACGCTCAATATCGCCCTTG TCTCGACAATCATCGGCACGAGTTTCGCCTTCGTGCTCTGCTTCTTTGCCTCCACCAATCTCGTCGGCGCCGGTCTTGTG CGCTGGGTGGTGCGCCGGGTGATGGAAGTGCTGCGCGCCTTTCCGGAAATCGTCGTCGCCGGGCTGCTGACCGCTATCCT CTCGATCGGTCCGATCGCCGCCATCATCGCGATTTCGGTCCATACGATTGGTGCGCTGGGCAAGCTGTTCTTCGAAGTCG TGGAAAATGCCGATATGAAGCCGGATGAAGGCCTGCGTGCCGCCGGTGCCAACTGGCTGGAGCGGGTACGCTTCGCCATC GTGCCGCAGGTCCTGCCCAATTTCGTCTCCTACGCACTGCTGCGCGCCGAAATCAATGTGCGCGCTTCCACGATCATCGG CGCCGTCGGCGGCGGCGGCATCGGCGAGGTCTTCCGTCTGTCGATCGGAAACGATCACGCCTCGAAGACCTATGCCATCA TCATCCTTCTGCTGATCACCATCATCGCCGTCGACCAGTTCTCCAGCTGGCTGCGCCGCAGACTGATCGGCCAACAATCC TTCGAATTCGGACGGGGAGCGGCCTGA
Upstream 100 bases:
>100_bases GACGCCCGTAAGTCCGTTATCGGCGGCTGATCCTCAGATCATATTCGGAAGCGGCGGTGCCTTGCGGCGTCGCCGCTTTT GCCAATAAAGGAAAAGCGGC
Downstream 100 bases:
>100_bases TGTCGTCCAGCTTCATTCTCAACACCGCCGAGCGCGAGAGGCTGACGGCTGCACATCGCCATGTGTTCAACCGCAGTTTC ATGCAACGATATGGTCTGCT
Product: ABC transporter, membrane spanning protein (phosphonate)
Products: 3-phospho-serine [Cytoplasm]; phosphite [Cytoplasm]; ADP; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 327
Protein sequence:
>328_residues MATTLHNGTLSPEGLSASSRTVMRHYQQQLATRRIYTVISLVIFLVILAASLNFANAANSGKFFERLPYFFDFMKTFVPD SPLEIFRAMFDLPSPYADGSLKYNYVADRVYITDGFYIPHFIYQLIITLNIALVSTIIGTSFAFVLCFFASTNLVGAGLV RWVVRRVMEVLRAFPEIVVAGLLTAILSIGPIAAIIAISVHTIGALGKLFFEVVENADMKPDEGLRAAGANWLERVRFAI VPQVLPNFVSYALLRAEINVRASTIIGAVGGGGIGEVFRLSIGNDHASKTYAIIILLLITIIAVDQFSSWLRRRLIGQQS FEFGRGAA
Sequences:
>Translated_328_residues MATTLHNGTLSPEGLSASSRTVMRHYQQQLATRRIYTVISLVIFLVILAASLNFANAANSGKFFERLPYFFDFMKTFVPD SPLEIFRAMFDLPSPYADGSLKYNYVADRVYITDGFYIPHFIYQLIITLNIALVSTIIGTSFAFVLCFFASTNLVGAGLV RWVVRRVMEVLRAFPEIVVAGLLTAILSIGPIAAIIAISVHTIGALGKLFFEVVENADMKPDEGLRAAGANWLERVRFAI VPQVLPNFVSYALLRAEINVRASTIIGAVGGGGIGEVFRLSIGNDHASKTYAIIILLLITIIAVDQFSSWLRRRLIGQQS FEFGRGAA >Mature_327_residues ATTLHNGTLSPEGLSASSRTVMRHYQQQLATRRIYTVISLVIFLVILAASLNFANAANSGKFFERLPYFFDFMKTFVPDS PLEIFRAMFDLPSPYADGSLKYNYVADRVYITDGFYIPHFIYQLIITLNIALVSTIIGTSFAFVLCFFASTNLVGAGLVR WVVRRVMEVLRAFPEIVVAGLLTAILSIGPIAAIIAISVHTIGALGKLFFEVVENADMKPDEGLRAAGANWLERVRFAIV PQVLPNFVSYALLRAEINVRASTIIGAVGGGGIGEVFRLSIGNDHASKTYAIIILLLITIIAVDQFSSWLRRRLIGQQSF EFGRGAA
Specific function: Part of the binding-protein-dependent transport system for phosphonates; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG3639
COG function: function code P; ABC-type phosphate/phosphonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR005769 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 36083; Mature: 35952
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATTLHNGTLSPEGLSASSRTVMRHYQQQLATRRIYTVISLVIFLVILAASLNFANAANS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC GKFFERLPYFFDFMKTFVPDSPLEIFRAMFDLPSPYADGSLKYNYVADRVYITDGFYIPH CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCHHH FIYQLIITLNIALVSTIIGTSFAFVLCFFASTNLVGAGLVRWVVRRVMEVLRAFPEIVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLTAILSIGPIAAIIAISVHTIGALGKLFFEVVENADMKPDEGLRAAGANWLERVRFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VPQVLPNFVSYALLRAEINVRASTIIGAVGGGGIGEVFRLSIGNDHASKTYAIIILLLIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHH IIAVDQFSSWLRRRLIGQQSFEFGRGAA HHHHHHHHHHHHHHHHCHHHHCCCCCCC >Mature Secondary Structure ATTLHNGTLSPEGLSASSRTVMRHYQQQLATRRIYTVISLVIFLVILAASLNFANAANS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC GKFFERLPYFFDFMKTFVPDSPLEIFRAMFDLPSPYADGSLKYNYVADRVYITDGFYIPH CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCHHH FIYQLIITLNIALVSTIIGTSFAFVLCFFASTNLVGAGLVRWVVRRVMEVLRAFPEIVVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GLLTAILSIGPIAAIIAISVHTIGALGKLFFEVVENADMKPDEGLRAAGANWLERVRFAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VPQVLPNFVSYALLRAEINVRASTIIGAVGGGGIGEVFRLSIGNDHASKTYAIIILLLIT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCCCHHHHHHHHHHHHHH IIAVDQFSSWLRRRLIGQQSFEFGRGAA HHHHHHHHHHHHHHHHCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]
Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]