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The map label for this gene is gmk [C]

Identifier: 159184194

GI number: 159184194

Start: 172384

End: 172935

Strand: Reverse

Name: gmk [C]

Synonym: Atu0168

Alternate gene names: 159184194

Gene position: 172935-172384 (Counterclockwise)

Preceding gene: 15887522

Following gene: 15887520

Centisome position: 6.09

GC content: 61.96

Gene sequence:

>552_bases
ATGATCGTGATTGTCGGCCCGAGCGGGGCCGGCAAGGACACGCTGATGGACTATGCGGCGGCACAGCTGTCCGGCCGCCC
GGGTTTCCATTTCACGCGCCGTGTCATTACCCGCAGCTGTGATGCGGGCGGGGAAAATCACGATGCCGTTTCGATGCACG
AGTTCAACCAGCTGGAAGACGCAGGTGCCTTCGCGGTCTCCTGGCAGGCGCACGGTCTGAAATACGGCATTCCGGCCGCC
GTCTATCGCCATCTCGAAGCGGGAGATGTTGTCATCGCCAATGGGTCGCGCTCTGCCCTCCCGCATTTCGGCACGGCCTT
TTCCCGTCTGAAGGTCGTGAACATCGTTGCACGGCCAGATGTGCTGGCGAGGCGGCTGGAACAGCGCGGACGGGAAAGCC
GGGACGATATCCTGCGCCGGCTGGAACGCAGCTCGCTGGCTGTCGCCGGGGATTTCGATGTCACGACAGTCGATAATAGC
GGCGCAATCGAAGATGCTGGCAAAACCATCATGCAGGTGCTGCAGCAAAGCGCCGGTTCCAGCCAACCTTAA

Upstream 100 bases:

>100_bases
AGGATGGTGTGCCGGTTGCTCGTTCGGTCTGGCGCCAGGGCAAGCGCGTGGCATGACCACCGGTGGAGAAGATAGCCGGC
GCACATTGTCGCCCGGCACG

Downstream 100 bases:

>100_bases
AATGCCGCAGTCGGTCTGCTCGACAAACGCGCTTTCAAGGCTTACCATCAGGCGACAATTTCCAAACATGGTACGCCAAG
GCGAGGGATGCCCGAAAAAA

Product: guanylate kinase

Products: NA

Alternate protein names: TdRPase 1 [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MIVIVGPSGAGKDTLMDYAAAQLSGRPGFHFTRRVITRSCDAGGENHDAVSMHEFNQLEDAGAFAVSWQAHGLKYGIPAA
VYRHLEAGDVVIANGSRSALPHFGTAFSRLKVVNIVARPDVLARRLEQRGRESRDDILRRLERSSLAVAGDFDVTTVDNS
GAIEDAGKTIMQVLQQSAGSSQP

Sequences:

>Translated_183_residues
MIVIVGPSGAGKDTLMDYAAAQLSGRPGFHFTRRVITRSCDAGGENHDAVSMHEFNQLEDAGAFAVSWQAHGLKYGIPAA
VYRHLEAGDVVIANGSRSALPHFGTAFSRLKVVNIVARPDVLARRLEQRGRESRDDILRRLERSSLAVAGDFDVTTVDNS
GAIEDAGKTIMQVLQQSAGSSQP
>Mature_183_residues
MIVIVGPSGAGKDTLMDYAAAQLSGRPGFHFTRRVITRSCDAGGENHDAVSMHEFNQLEDAGAFAVSWQAHGLKYGIPAA
VYRHLEAGDVVIANGSRSALPHFGTAFSRLKVVNIVARPDVLARRLEQRGRESRDDILRRLERSSLAVAGDFDVTTVDNS
GAIEDAGKTIMQVLQQSAGSSQP

Specific function: Belongs To An Operon Involved In Alkylphosphonate Uptake And C-P Lyase. Exact Function Not Known. [C]

COG id: COG3709

COG function: function code P; Uncharacterized component of phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family. Type 2 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790532, Length=177, Percent_Identity=36.7231638418079, Blast_Score=103, Evalue=9e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000312
- InterPro:   IPR017459
- InterPro:   IPR012699
- InterPro:   IPR013102
- InterPro:   IPR000053
- InterPro:   IPR017872
- InterPro:   IPR013466 [H]

Pfam domain/function: PF00591 Glycos_transf_3; PF07831 PYNP_C [H]

EC number: =2.4.2.4 [H]

Molecular weight: Translated: 19645; Mature: 19645

Theoretical pI: Translated: 7.16; Mature: 7.16

Prosite motif: PS50052 GUANYLATE_KINASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVIVGPSGAGKDTLMDYAAAQLSGRPGFHFTRRVITRSCDAGGENHDAVSMHEFNQLED
CEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
AGAFAVSWQAHGLKYGIPAAVYRHLEAGDVVIANGSRSALPHFGTAFSRLKVVNIVARPD
CCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCH
VLARRLEQRGRESRDDILRRLERSSLAVAGDFDVTTVDNSGAIEDAGKTIMQVLQQSAGS
HHHHHHHHHCCCCHHHHHHHHHHHCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
SQP
CCC
>Mature Secondary Structure
MIVIVGPSGAGKDTLMDYAAAQLSGRPGFHFTRRVITRSCDAGGENHDAVSMHEFNQLED
CEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHC
AGAFAVSWQAHGLKYGIPAAVYRHLEAGDVVIANGSRSALPHFGTAFSRLKVVNIVARPD
CCCEEEEEECCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCH
VLARRLEQRGRESRDDILRRLERSSLAVAGDFDVTTVDNSGAIEDAGKTIMQVLQQSAGS
HHHHHHHHHCCCCHHHHHHHHHHHCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHCCC
SQP
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA