Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184189

Identifier: 159184189

GI number: 159184189

Start: 162149

End: 162859

Strand: Reverse

Name: 159184189

Synonym: Atu0156

Alternate gene names: NA

Gene position: 162859-162149 (Counterclockwise)

Preceding gene: 159184192

Following gene: 159184188

Centisome position: 5.73

GC content: 60.62

Gene sequence:

>711_bases
ATGACCAGACAGAGACGCCGTAACATCATCAGGGCAAGGCGCACCGGCACCGGTATTGCGCTTGTCGCCGCCATTTCATT
CATCGCCGGAATGACGGATGCGGTGGGTCTTCATCTGTCCGGCGATTTCGTTTCCTTCATGACTGGCAACACCACCCGTG
CGGCCATCTCACTGGAAGCGGGCGTTTATTCCCATGCCGCGAAACTGCTTTTCGCGATCGTCGCTTTTGTGGCGGGCAAT
GCCGGGGGCATCGTGGTTGCGCATAAATTCGACCGGAGCATCCTTGCCGTTCTTGTGGGCGTGGGGTTGCTGGTGGCGAT
TGCCGCCTTGCTGCGCGGCGACGCTTTCGCCCTGACACAGTTTTATCTTGTGGTTTTCGCCATGGGCATGGTCAACGCGG
CCGTTGAGCATATTGAGGGCCTGCCAATCGGCCTCACTTATGTTACCGGCGCCCTTTCCCGTTTCGGGCGTGGCATCGGC
CGCTTTCTTCTGGGGGAGCGAAGTCTCGATTGGGGCATTCAGATCGTGCCCTGGCTCGGCATGATCAGCGGGGCAATCTG
CGGGGCCGTATTGGGCGTCACGCTACAGTCCGGCGCCCTGTGGGTGGTTGCGGCAACCGTTTTTGCGGTCGCCGTCGCCA
CCTTGGTCATTCCGCGTTCGCTGCGCCACCGCTATAATCAAAGGGTCCGGATCAGGCGCATCGCGCCTTGA

Upstream 100 bases:

>100_bases
AACGCTTCCAGAAAGATTGCAAACGGACCGCCCGGCATTCTAGACATAGGATAACACAGCCAGGCGCATCGGCCCGCTGT
TTTCTATATCGAGTCTTTCC

Downstream 100 bases:

>100_bases
CGGACCGCACCGTCACTTTCGCGAAATCGTCACGAATTTCGTGCCGCGGACCCGCACCGTCATCAGGCAGGGTTCCTTAT
CGGTGCGCTCGCAATAACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTRQRRRNIIRARRTGTGIALVAAISFIAGMTDAVGLHLSGDFVSFMTGNTTRAAISLEAGVYSHAAKLLFAIVAFVAGN
AGGIVVAHKFDRSILAVLVGVGLLVAIAALLRGDAFALTQFYLVVFAMGMVNAAVEHIEGLPIGLTYVTGALSRFGRGIG
RFLLGERSLDWGIQIVPWLGMISGAICGAVLGVTLQSGALWVVAATVFAVAVATLVIPRSLRHRYNQRVRIRRIAP

Sequences:

>Translated_236_residues
MTRQRRRNIIRARRTGTGIALVAAISFIAGMTDAVGLHLSGDFVSFMTGNTTRAAISLEAGVYSHAAKLLFAIVAFVAGN
AGGIVVAHKFDRSILAVLVGVGLLVAIAALLRGDAFALTQFYLVVFAMGMVNAAVEHIEGLPIGLTYVTGALSRFGRGIG
RFLLGERSLDWGIQIVPWLGMISGAICGAVLGVTLQSGALWVVAATVFAVAVATLVIPRSLRHRYNQRVRIRRIAP
>Mature_235_residues
TRQRRRNIIRARRTGTGIALVAAISFIAGMTDAVGLHLSGDFVSFMTGNTTRAAISLEAGVYSHAAKLLFAIVAFVAGNA
GGIVVAHKFDRSILAVLVGVGLLVAIAALLRGDAFALTQFYLVVFAMGMVNAAVEHIEGLPIGLTYVTGALSRFGRGIGR
FLLGERSLDWGIQIVPWLGMISGAICGAVLGVTLQSGALWVVAATVFAVAVATLVIPRSLRHRYNQRVRIRRIAP

Specific function: Unknown

COG id: COG3619

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0700 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010699 [H]

Pfam domain/function: PF06912 DUF1275 [H]

EC number: NA

Molecular weight: Translated: 24982; Mature: 24851

Theoretical pI: Translated: 12.12; Mature: 12.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRQRRRNIIRARRTGTGIALVAAISFIAGMTDAVGLHLSGDFVSFMTGNTTRAAISLEA
CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEECCCCHHHHCCCCCEEEEEEHH
GVYSHAAKLLFAIVAFVAGNAGGIVVAHKFDRSILAVLVGVGLLVAIAALLRGDAFALTQ
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FYLVVFAMGMVNAAVEHIEGLPIGLTYVTGALSRFGRGIGRFLLGERSLDWGIQIVPWLG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MISGAICGAVLGVTLQSGALWVVAATVFAVAVATLVIPRSLRHRYNQRVRIRRIAP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
TRQRRRNIIRARRTGTGIALVAAISFIAGMTDAVGLHLSGDFVSFMTGNTTRAAISLEA
CHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHEEEECCCCHHHHCCCCCEEEEEEHH
GVYSHAAKLLFAIVAFVAGNAGGIVVAHKFDRSILAVLVGVGLLVAIAALLRGDAFALTQ
HHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FYLVVFAMGMVNAAVEHIEGLPIGLTYVTGALSRFGRGIGRFLLGERSLDWGIQIVPWLG
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
MISGAICGAVLGVTLQSGALWVVAATVFAVAVATLVIPRSLRHRYNQRVRIRRIAP
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9659380; 11481432 [H]