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The map label for this gene is yadS [H]

Identifier: 159184188

GI number: 159184188

Start: 160901

End: 161539

Strand: Reverse

Name: yadS [H]

Synonym: Atu0154

Alternate gene names: 159184188

Gene position: 161539-160901 (Counterclockwise)

Preceding gene: 159184189

Following gene: 159184185

Centisome position: 5.68

GC content: 60.09

Gene sequence:

>639_bases
ATGACGCTGCTGGGTTTTCTCGATTATGCCGGTGTCGCCGTCTTTGCCGCAACCGGCGCCTTGGCCGCCTCACGCAAGCA
GCTCGACCTGATCGGCTTCCTGTTCTTCGCGGCGGCGACCGGCATTGGCGGCGGCACGGTTCGCGATCTCGTGCTGGGCA
GAACGCCGGTGTTCTGGGTGATAAACCCCACCTATATTCTCGTCTGTGTCTCGGTCGCGGTTCTGCTGTTCTTTACCGCG
CATCTTTTCGAATCCCGTTATCGGGTATTGATCTGGCTTGATGCGCTCGGCCTTTCCGCCTATTGCGTCATGGGAGCAGC
CAAAGGTCTCGCTGCAAGCGGCTCGGCAACCGTCGCCATCGTCACAGGTGTTCTGACGGCGACGTTCGGTGGTGTTTTGC
GCGATATTATGGCCGGAGAGCCGTCGGTTCTGCTGCGCCCGGAAATCTACATCACCTGCGCGCTTTTGGGCTCTTCCATC
TTCATTGTCGTCTATTTCTTCGGCGCACCGCTCTATGCCGCATCAGCGGCGGGTTTCCTGACGGCCTTCTGCGTCCGATC
CGGCGCGCTGATCTTCGGATGGACCTTCCCGCCCTATAAGGGCAAACCGGGCAGACGGCCGGAAGACGTCATGAAGTGA

Upstream 100 bases:

>100_bases
CGGTTATGGATGTTGCGATCATCCGGGCGGTCAGCCTAGAGTTTAGTGCTTGCGCGACACTGACGTGTTTGCGGGCCGTC
TTTCTGGGGGGAACCTTTTC

Downstream 100 bases:

>100_bases
TATATAGAAATGACCGCTGAAAACAGAGATGGCGCCCAGGGGCGCCATTTTCACATTCTATACCAGACAAAAACGTCAAC
CGCGCTTGCGACGAAGGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MTLLGFLDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWVINPTYILVCVSVAVLLFFTA
HLFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAIVTGVLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSI
FIVVYFFGAPLYAASAAGFLTAFCVRSGALIFGWTFPPYKGKPGRRPEDVMK

Sequences:

>Translated_212_residues
MTLLGFLDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWVINPTYILVCVSVAVLLFFTA
HLFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAIVTGVLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSI
FIVVYFFGAPLYAASAAGFLTAFCVRSGALIFGWTFPPYKGKPGRRPEDVMK
>Mature_211_residues
TLLGFLDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWVINPTYILVCVSVAVLLFFTAH
LFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAIVTGVLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSIF
IVVYFFGAPLYAASAAGFLTAFCVRSGALIFGWTFPPYKGKPGRRPEDVMK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI87082304, Length=165, Percent_Identity=35.7575757575758, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1786352, Length=202, Percent_Identity=34.6534653465347, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22355; Mature: 22224

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLLGFLDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWV
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
INPTYILVCVSVAVLLFFTAHLFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAI
ECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCHHHHHHHHHHCCCCCCCCCHHHH
VTGVLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSIFIVVYFFGAPLYAASAAGFL
HHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEHHHHCCHHHHHHHHHCCHHHHHHHHHHH
TAFCVRSGALIFGWTFPPYKGKPGRRPEDVMK
HHHHHHCCCEEEEECCCCCCCCCCCCCHHHCC
>Mature Secondary Structure 
TLLGFLDYAGVAVFAATGALAASRKQLDLIGFLFFAAATGIGGGTVRDLVLGRTPVFWV
CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEE
INPTYILVCVSVAVLLFFTAHLFESRYRVLIWLDALGLSAYCVMGAAKGLAASGSATVAI
ECHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEHHCHHHHHHHHHHCCCCCCCCCHHHH
VTGVLTATFGGVLRDIMAGEPSVLLRPEIYITCALLGSSIFIVVYFFGAPLYAASAAGFL
HHHHHHHHHHHHHHHHHCCCCCEEECCHHEEEHHHHCCHHHHHHHHHCCHHHHHHHHHHH
TAFCVRSGALIFGWTFPPYKGKPGRRPEDVMK
HHHHHHCCCEEEEECCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA