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The map label for this gene is slyA [C]

Identifier: 159184161

GI number: 159184161

Start: 112000

End: 112446

Strand: Reverse

Name: slyA [C]

Synonym: Atu0109

Alternate gene names: 159184161

Gene position: 112446-112000 (Counterclockwise)

Preceding gene: 15887464

Following gene: 159184160

Centisome position: 3.96

GC content: 56.15

Gene sequence:

>447_bases
ATGGACGGAAGAATGGGTTTTTCCCGGGATGAATCGGCAATCTATCTCGCCGCGAAGATGGCGCGGGAATTTACCATGGC
GCTGCAGAAAAGAGCCGCTGCGCTCGGTTTTTCTCCCGGCCAATTTCCCATCCTCATCGAGCTCTGGCATGAAGAAGGCC
TGACCCAGCGGCAATTGCTTGATCGAATCGATGTCGAACAGGCAACGCTTGCCAACACGCTGTCTCGCATGGAACGTGAC
GGGCTGATTGTCCGCAAATCCCATCCGAGCGATCGCCGCGCCCAGATCATCGAACTGACCCAGCGTGGCAGGGATCTGGA
GGCGAATGCCATCGCCGCTTCCGAGGCCACCGAAGACACATTGCTTGCGAATTTCCGCCGCTTCGAGCGACAGCTTTTGC
TGGAATATATGCGCCGGGCGATCGAAAGCGCAAAAAAAGCAAAATAA

Upstream 100 bases:

>100_bases
TGGCGGTTTTATTTTGCCCCCTGTTTGGGCTAGTCTAAACATATCATGCGATATATACCACGCTATTAAAGTTACCGGCT
TTCCGCTGGTGGCGACGTGC

Downstream 100 bases:

>100_bases
CGTCTACGGTCCAAAACCGCTTCGCAGTTTTCGTGAACTGCTCTATCGTTCCGGCGGCCACGCGCTTGCCGATTCACGAC
AAGCCCGCGCCTTGTTTCCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein; HTH-Type Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator PecS; Transcriptional Regulator Marr Family; MarR Family Transcriptional Regulator Protein

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDGRMGFSRDESAIYLAAKMAREFTMALQKRAAALGFSPGQFPILIELWHEEGLTQRQLLDRIDVEQATLANTLSRMERD
GLIVRKSHPSDRRAQIIELTQRGRDLEANAIAASEATEDTLLANFRRFERQLLLEYMRRAIESAKKAK

Sequences:

>Translated_148_residues
MDGRMGFSRDESAIYLAAKMAREFTMALQKRAAALGFSPGQFPILIELWHEEGLTQRQLLDRIDVEQATLANTLSRMERD
GLIVRKSHPSDRRAQIIELTQRGRDLEANAIAASEATEDTLLANFRRFERQLLLEYMRRAIESAKKAK
>Mature_148_residues
MDGRMGFSRDESAIYLAAKMAREFTMALQKRAAALGFSPGQFPILIELWHEEGLTQRQLLDRIDVEQATLANTLSRMERD
GLIVRKSHPSDRRAQIIELTQRGRDLEANAIAASEATEDTLLANFRRFERQLLLEYMRRAIESAKKAK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16922; Mature: 16922

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGRMGFSRDESAIYLAAKMAREFTMALQKRAAALGFSPGQFPILIELWHEEGLTQRQLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHH
DRIDVEQATLANTLSRMERDGLIVRKSHPSDRRAQIIELTQRGRDLEANAIAASEATEDT
HHHCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHH
LLANFRRFERQLLLEYMRRAIESAKKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDGRMGFSRDESAIYLAAKMAREFTMALQKRAAALGFSPGQFPILIELWHEEGLTQRQLL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHCCCHHHHHH
DRIDVEQATLANTLSRMERDGLIVRKSHPSDRRAQIIELTQRGRDLEANAIAASEATEDT
HHHCHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHH
LLANFRRFERQLLLEYMRRAIESAKKAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA