Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is hisE
Identifier: 159184135
GI number: 159184135
Start: 40779
End: 41102
Strand: Reverse
Name: hisE
Synonym: Atu0038
Alternate gene names: 159184135
Gene position: 41102-40779 (Counterclockwise)
Preceding gene: 15887397
Following gene: 159184134
Centisome position: 1.45
GC content: 59.88
Gene sequence:
>324_bases ATGAGCGCATTTTCCCTTTCCGATCTGGAACGCATCGTCGCGAAGCGTGCCGCTGCATCCCCTGATGAATCCTGGACGGC CAAGCTGGTTGCTGCCGGCCAGGAGCGCGCAGCAAAGAAGCTGGGCGAAGAAGCGGTTGAAGCCGTCATCGCTGCCATCG CACAGGATCGCGACGGGCTTAAAAACGAAGCAGCCGACCTGCTTTACCATCTGCTGGTGGTGCTGAAGATCGCCGACATT CCCTTGAGCGATGTTTTTGCCGAACTGGAGCGTCGCACAGGTCAGACCGGCCTTGCGGAAAAGGCGGCGAGGCCGACACC ATGA
Upstream 100 bases:
>100_bases TTCCATCTTCCACTTCGGCACCTATTCGATCGGTGAAGCCAAGAGCTACATGGCCGAACATGGCATTGCCATGCGTCTCG ACTGATTGCAGGAACATCCC
Downstream 100 bases:
>100_bases AGATTGAGGCGGGCAGCGGGGAGAGAGGCATGCCAGGCACACTCGATCATTTTCGTGCGGACGAATATTCGCCCTATCAC TTCTTCAGTTCCGAAGAATG
Product: phosphoribosyl-ATP pyrophosphatase
Products: NA
Alternate protein names: PRA-PH
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MSAFSLSDLERIVAKRAAASPDESWTAKLVAAGQERAAKKLGEEAVEAVIAAIAQDRDGLKNEAADLLYHLLVVLKIADI PLSDVFAELERRTGQTGLAEKAARPTP
Sequences:
>Translated_107_residues MSAFSLSDLERIVAKRAAASPDESWTAKLVAAGQERAAKKLGEEAVEAVIAAIAQDRDGLKNEAADLLYHLLVVLKIADI PLSDVFAELERRTGQTGLAEKAARPTP >Mature_106_residues SAFSLSDLERIVAKRAAASPDESWTAKLVAAGQERAAKKLGEEAVEAVIAAIAQDRDGLKNEAADLLYHLLVVLKIADIP LSDVFAELERRTGQTGLAEKAARPTP
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0140
COG function: function code E; Phosphoribosyl-ATP pyrophosphohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-PH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=87, Percent_Identity=48.2758620689655, Blast_Score=86, Evalue=7e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS2_AGRT5 (Q8UJ91)
Other databases:
- EMBL: AE007869 - PIR: AG2581 - PIR: E97363 - RefSeq: NP_353077.2 - ProteinModelPortal: Q8UJ91 - SMR: Q8UJ91 - STRING: Q8UJ91 - GeneID: 1132076 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0038 - eggNOG: COG0140 - HOGENOM: HBG646527 - OMA: ETVMAAK - ProtClustDB: PRK00400 - BioCyc: ATUM176299-1:ATU0038-MONOMER - GO: GO:0005737 - HAMAP: MF_01020 - InterPro: IPR008179 - InterPro: IPR021130 - TIGRFAMs: TIGR03188
Pfam domain/function: PF01503 PRA-PH
EC number: =3.6.1.31
Molecular weight: Translated: 11411; Mature: 11280
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFSLSDLERIVAKRAAASPDESWTAKLVAAGQERAAKKLGEEAVEAVIAAIAQDRDGL CCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KNEAADLLYHLLVVLKIADIPLSDVFAELERRTGQTGLAEKAARPTP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure SAFSLSDLERIVAKRAAASPDESWTAKLVAAGQERAAKKLGEEAVEAVIAAIAQDRDGL CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH KNEAADLLYHLLVVLKIADIPLSDVFAELERRTGQTGLAEKAARPTP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194