Definition | Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequence. |
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Accession | NC_003065 |
Length | 214,233 |
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The map label for this gene is 159161968
Identifier: 159161968
GI number: 159161968
Start: 97030
End: 97623
Strand: Direct
Name: 159161968
Synonym: Atu6081
Alternate gene names: NA
Gene position: 97030-97623 (Clockwise)
Preceding gene: 159161967
Following gene: 159161969
Centisome position: 45.29
GC content: 63.97
Gene sequence:
>594_bases ATGAAGCGTGCCCGTGCCGGCGGGCGCGGCAGTGTCTTCACGCCCAGTGATTTCCTGGACGTGGCCGCGCGCGCGGCCGT CGACCAAGCGCTTTCTCGGTTGGCCAGGAATGGAAAGCTTCGGCGCCTGACGCGAGGCCTGTACGACTTCCCAAAGGTTC ATCCGCAACTTGGGGCCCTTTCGCCTAGGCCTGACGATGTGGCGAAAGCGTTGGCGCGGGAGACCGGATCTCAGGTGCAG ATCGCCGGTGCGCGCGCGGCGAATGCCCTTGGCCTGTCAACACAGGTCCCCGCACATAGCATCTATCTGACTGATGGCCC GTCGCGCCGTGTTGTGCTCGATAAGCGCGTCGTTGATCTGCGCCACGCTTCGCCCAAGCACCTTATTGCTCCGGGCAGTG CTGCCGGCACAGTTGTTCAGGCCCTTCGTCACGTCGGGGCGGTGCGTGCCGCCGACGTTGCGCAGATCGCCTCGCGTCGA CTGTCGGCCAGCGACAAGAAGACGCTAGCATCCAATGCGGTCCGGGCTCCCGCTTGGATGCGTTCGACGCTGGTCTCGAT CGCTAACGCAATGCCGAGTGAGATAGATGGATAA
Upstream 100 bases:
>100_bases TCATATTGTTCGAACATGAAGCGCGCTCTTGAATGTCAGAAAAATATAGCCTAATTTCTGACGCATGAAACCCCTCGCGA CATCAGTTCCAGACCTAATT
Downstream 100 bases:
>100_bases CCATGCGAATGTATCCATCAAGCTGATAGGAAAGAATTTGCTCTCGTTGCAGTCTCAAATGTTGGGAACTGTTGCTCCGT TCAAATTGCTTTTCGCTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKRARAGGRGSVFTPSDFLDVAARAAVDQALSRLARNGKLRRLTRGLYDFPKVHPQLGALSPRPDDVAKALARETGSQVQ IAGARAANALGLSTQVPAHSIYLTDGPSRRVVLDKRVVDLRHASPKHLIAPGSAAGTVVQALRHVGAVRAADVAQIASRR LSASDKKTLASNAVRAPAWMRSTLVSIANAMPSEIDG
Sequences:
>Translated_197_residues MKRARAGGRGSVFTPSDFLDVAARAAVDQALSRLARNGKLRRLTRGLYDFPKVHPQLGALSPRPDDVAKALARETGSQVQ IAGARAANALGLSTQVPAHSIYLTDGPSRRVVLDKRVVDLRHASPKHLIAPGSAAGTVVQALRHVGAVRAADVAQIASRR LSASDKKTLASNAVRAPAWMRSTLVSIANAMPSEIDG >Mature_197_residues MKRARAGGRGSVFTPSDFLDVAARAAVDQALSRLARNGKLRRLTRGLYDFPKVHPQLGALSPRPDDVAKALARETGSQVQ IAGARAANALGLSTQVPAHSIYLTDGPSRRVVLDKRVVDLRHASPKHLIAPGSAAGTVVQALRHVGAVRAADVAQIASRR LSASDKKTLASNAVRAPAWMRSTLVSIANAMPSEIDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20763; Mature: 20763
Theoretical pI: Translated: 12.02; Mature: 12.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRARAGGRGSVFTPSDFLDVAARAAVDQALSRLARNGKLRRLTRGLYDFPKVHPQLGAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC SPRPDDVAKALARETGSQVQIAGARAANALGLSTQVPAHSIYLTDGPSRRVVLDKRVVDL CCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHH RHASPKHLIAPGSAAGTVVQALRHVGAVRAADVAQIASRRLSASDKKTLASNAVRAPAWM HCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH RSTLVSIANAMPSEIDG HHHHHHHHHHCCCCCCC >Mature Secondary Structure MKRARAGGRGSVFTPSDFLDVAARAAVDQALSRLARNGKLRRLTRGLYDFPKVHPQLGAL CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC SPRPDDVAKALARETGSQVQIAGARAANALGLSTQVPAHSIYLTDGPSRRVVLDKRVVDL CCCHHHHHHHHHHHCCCEEEEECCHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHHH RHASPKHLIAPGSAAGTVVQALRHVGAVRAADVAQIASRRLSASDKKTLASNAVRAPAWM HCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH RSTLVSIANAMPSEIDG HHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA