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The map label for this gene is scpB [H]

Identifier: 159046567

GI number: 159046567

Start: 95285

End: 95902

Strand: Direct

Name: scpB [H]

Synonym: Dshi_4029

Alternate gene names: 159046567

Gene position: 95285-95902 (Clockwise)

Preceding gene: 159046566

Following gene: 159046568

Centisome position: 75.44

GC content: 65.86

Gene sequence:

>618_bases
ATGGCGAAGGATCGCTCAGACCCCGAACTGGATCGCGAGTTGCCCGATCTGCCGCCTGAGCTGCGCTGGCGGGAATGGAT
ACGCCGGATCGAGGCTGTGCTGTTTGCCTCCGCCTCGCCAGTCCCGCGCCAAGACCTCGCCCGCATCGTGGGGCAGGGCG
CCTCAGTCGATCTGCTGGTCGAGGACCTTGCCGCCGATCTGGATGGGCGGGCCTTCGAGATTGCCCAGGTCGCCGGCGGC
TGGATGTTCCGGACGCGGGCGGCCTATGCGCCCGCGATCCGGGCGGCGGCGGATATCGGGGATCAGTTTCTGGATCTGAG
CGAGTTCGACACCGCGGTCCTAGCCGCTATCGCCTATCACCAGCCGATCACGCGCGACGGGCTCAAGGACATCTTCGGCA
AGGAGATCAGCCGCGAGCTTATCGGGCGCTTGCATGCGCAGGGTTTGATCGGGACCGGACCGCGATCGCCGCGACGTGGC
GCGCCCTATACATTTGTGACGACGGAGCGGTTCTTGGCGGTGTTTGGGGTGGAGAGCCTGCAGGACCTGCCCGATCGGGA
GGGGCTGGAGGATGCGGGGCTGGGTCATCAAAAAGCTGAATCGGTCAGGGTGGATTGA

Upstream 100 bases:

>100_bases
CGGATCGCGCCGCGCGGCGGCTCTGCGACCGGCTGGTCGACCTCGGTGCGGTGCGCGAGCTGACCGGGCGCGACACTTTC
CGGCTCTACGGGGTGTAGCG

Downstream 100 bases:

>100_bases
TTCAGATTTGTCATTGGACGGATGAGGCCCAACAGGCGAGACTCTGGCCATGCAAAGCGGCGCATACGACCCTGTCGATC
TCGAACGCATCGATCCGGCC

Product: chromosome segregation and condensation protein ScpB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MAKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLVEDLAADLDGRAFEIAQVAGG
WMFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYHQPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRG
APYTFVTTERFLAVFGVESLQDLPDREGLEDAGLGHQKAESVRVD

Sequences:

>Translated_205_residues
MAKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLVEDLAADLDGRAFEIAQVAGG
WMFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYHQPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRG
APYTFVTTERFLAVFGVESLQDLPDREGLEDAGLGHQKAESVRVD
>Mature_204_residues
AKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLVEDLAADLDGRAFEIAQVAGGW
MFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYHQPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRGA
PYTFVTTERFLAVFGVESLQDLPDREGLEDAGLGHQKAESVRVD

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22589; Mature: 22458

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLV
CCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH
EDLAADLDGRAFEIAQVAGGWMFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYH
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
QPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRGAPYTFVTTERFLAVFGVESL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
QDLPDREGLEDAGLGHQKAESVRVD
HHCCCCCCCCCCCCCCHHCCCCCCC
>Mature Secondary Structure 
AKDRSDPELDRELPDLPPELRWREWIRRIEAVLFASASPVPRQDLARIVGQGASVDLLV
CCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHH
EDLAADLDGRAFEIAQVAGGWMFRTRAAYAPAIRAAADIGDQFLDLSEFDTAVLAAIAYH
HHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
QPITRDGLKDIFGKEISRELIGRLHAQGLIGTGPRSPRRGAPYTFVTTERFLAVFGVESL
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHH
QDLPDREGLEDAGLGHQKAESVRVD
HHCCCCCCCCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]