Definition | Dinoroseobacter shibae DFL 12 plasmid pDSHI03, complete sequence. |
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Accession | NC_009957 |
Length | 126,304 |
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The map label for this gene is 159046523
Identifier: 159046523
GI number: 159046523
Start: 43103
End: 43513
Strand: Direct
Name: 159046523
Synonym: Dshi_3984
Alternate gene names: NA
Gene position: 43103-43513 (Clockwise)
Preceding gene: 159046522
Following gene: 159046524
Centisome position: 34.13
GC content: 65.69
Gene sequence:
>411_bases ATGAGGCAGGCGCAGCACCTCGCCTTGGCCGCGCTGGCCCTAAGCCTGACGCCTACTTTCGCCGTTGCCGAGCGCAACCT AGTGCCAACCCTCGATCGCAGCTTTGACGTCTGTCCGGACCGGCCCGCCGAGCCCGTCTGGATGCAGGAAATCCCGCTCC GCCAAGCCTATCAGCGGGTTCTGGTTCAGGACATCTACCGCGCCCAGAACCTCGAGCGCATCGTCCAGACCGGCAGCTGC GATTGCGAGATCCGGTTCCCGTCCTGGGACGCGGCCGAGGCCGTGTTTCGGGAGAGCTACGCGAGCGACGAACGATGGGA AATGCTCGAAGCCTCGGACGGCTACAACCGCCGCGCCAACGCCGCCCGAACTGCCGCCAAGGCCATCTGCGACGCCGCAG GTAATTGGTAA
Upstream 100 bases:
>100_bases CAGACGGGTGGGAGGTGGTGTCGATCAGCACTTCGGAATTCGCCAATGTAGGACACACCGTTTTCCTGAAGCGTGAAACC ATAGCCACCGGAGCCACGGC
Downstream 100 bases:
>100_bases GGCAGCCCCGCGATGAGTGTCGTCACCTACTTCGTTGAAACCTCCCAAGCCTATCTCGACACCGCCGCTGAGACCCAGTT TGGTGCGGTTGCAGCAACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRVLVQDIYRAQNLERIVQTGSC DCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRANAARTAAKAICDAAGNW
Sequences:
>Translated_136_residues MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRVLVQDIYRAQNLERIVQTGSC DCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRANAARTAAKAICDAAGNW >Mature_136_residues MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRVLVQDIYRAQNLERIVQTGSC DCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRANAARTAAKAICDAAGNW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15389; Mature: 15389
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRV CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH LVQDIYRAQNLERIVQTGSCDCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRAN HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH AARTAAKAICDAAGNW HHHHHHHHHHHHCCCC >Mature Secondary Structure MRQAQHLALAALALSLTPTFAVAERNLVPTLDRSFDVCPDRPAEPVWMQEIPLRQAYQRV CCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHH LVQDIYRAQNLERIVQTGSCDCEIRFPSWDAAEAVFRESYASDERWEMLEASDGYNRRAN HHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCHHH AARTAAKAICDAAGNW HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA