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The map label for this gene is 15898992

Identifier: 15898992

GI number: 15898992

Start: 2040411

End: 2040887

Strand: Reverse

Name: 15898992

Synonym: SSO2218

Alternate gene names: NA

Gene position: 2040887-2040411 (Counterclockwise)

Preceding gene: 15898993

Following gene: 15898991

Centisome position: 68.21

GC content: 33.12

Gene sequence:

>477_bases
ATGCATATCATATTTGATACCTCAGGGTTTTTATCTGGACTGCAACTCTCTTTAGATAGAGTCTATACTACGCAGGAGGT
CATAAATGAAATAAAGGATAAATACTCCAGATTTAACCTGGAAATTGCTATATCGTCTGGAAAGGTAATAATAATGAAGC
CTTCTACAAGAAGTGTAGAAAAAGTAACTAAAGTATTAAATCTTACCAAAGAGAGAAAACTATCTAATACAGATATATCA
GTGATTGCACTTGCCCTAGATCTACAACCGTCAATTGTATTTACTGATGACTTGTCCGTACAAAATATACTTAAACAACT
TGGAATACAATTCTCGTCAGTCAAAATCAATAAAAAAGTGGAAAAATCCTTCAAATTCAAATATGTCTGCGTCAACTGTA
AAAGAGAATTTAACATAGACCATGGAGAGTGCCCATATTGTGGTGGAAAAGTAGTAAAGAGAAGAATAATGGAGTGA

Upstream 100 bases:

>100_bases
ACCTTAATAAAAACTAATCAAGAAATTACGGTAAGAGTCTCTCAACACAAGGCAAAAATCTTAAGATTTTTCAAACTAGA
CTTAATAGGAGAAGTATTAC

Downstream 100 bases:

>100_bases
TTGCAATGCTTCTTCTAATCATAAAAACAAATTAAAAAGTTATAAGAAGTAAAAGATATGGACTACTACACACTTTACGA
CCTTTCCTTAGAAAAACCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MHIIFDTSGFLSGLQLSLDRVYTTQEVINEIKDKYSRFNLEIAISSGKVIIMKPSTRSVEKVTKVLNLTKERKLSNTDIS
VIALALDLQPSIVFTDDLSVQNILKQLGIQFSSVKINKKVEKSFKFKYVCVNCKREFNIDHGECPYCGGKVVKRRIME

Sequences:

>Translated_158_residues
MHIIFDTSGFLSGLQLSLDRVYTTQEVINEIKDKYSRFNLEIAISSGKVIIMKPSTRSVEKVTKVLNLTKERKLSNTDIS
VIALALDLQPSIVFTDDLSVQNILKQLGIQFSSVKINKKVEKSFKFKYVCVNCKREFNIDHGECPYCGGKVVKRRIME
>Mature_158_residues
MHIIFDTSGFLSGLQLSLDRVYTTQEVINEIKDKYSRFNLEIAISSGKVIIMKPSTRSVEKVTKVLNLTKERKLSNTDIS
VIALALDLQPSIVFTDDLSVQNILKQLGIQFSSVKINKKVEKSFKFKYVCVNCKREFNIDHGECPYCGGKVVKRRIME

Specific function: Unknown

COG id: COG1439

COG function: function code R; Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0129 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006596
- InterPro:   IPR022907
- InterPro:   IPR022785 [H]

Pfam domain/function: PF08745 UPF0278 [H]

EC number: NA

Molecular weight: Translated: 17994; Mature: 17994

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIIFDTSGFLSGLQLSLDRVYTTQEVINEIKDKYSRFNLEIAISSGKVIIMKPSTRSVE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEECCCCCHHH
KVTKVLNLTKERKLSNTDISVIALALDLQPSIVFTDDLSVQNILKQLGIQFSSVKINKKV
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHCCEEEEEEECHHH
EKSFKFKYVCVNCKREFNIDHGECPYCGGKVVKRRIME
HHCCEEEEEEEECCEECCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MHIIFDTSGFLSGLQLSLDRVYTTQEVINEIKDKYSRFNLEIAISSGKVIIMKPSTRSVE
CEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCEEEEECCCCCHHH
KVTKVLNLTKERKLSNTDISVIALALDLQPSIVFTDDLSVQNILKQLGIQFSSVKINKKV
HHHHHHHHHHHHCCCCCCEEEEEEEEECCCCEEEECCCCHHHHHHHHCCEEEEEEECHHH
EKSFKFKYVCVNCKREFNIDHGECPYCGGKVVKRRIME
HHCCEEEEEEEECCEECCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]