Definition | Sulfolobus solfataricus P2 chromosome, complete genome. |
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Accession | NC_002754 |
Length | 2,992,245 |
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The map label for this gene is 15898854
Identifier: 15898854
GI number: 15898854
Start: 1883264
End: 1884178
Strand: Reverse
Name: 15898854
Synonym: SSO2066
Alternate gene names: NA
Gene position: 1884178-1883264 (Counterclockwise)
Preceding gene: 15898858
Following gene: 15898848
Centisome position: 62.97
GC content: 30.82
Gene sequence:
>915_bases ATGGCTCAAACTCATGAAATGTTAGAGAAATTTTTAAATAATTTTCTTAAATTAGTAATTATAAGCGAGTTAATGAACAT AGATATCGACGCCAATAATTTAGATAGACTTTTGAAAGTATCTAGTGATATTGCAGTGGATCTATCCATAGGTATCGCGA GGAGAAAATTTGGTAATGACAAAACTAAGAAAATAAAAGAAGGTCTAAGTAACGCATATTTATGGTTACAATCAACACCT ACCACTCCAGAGTTATATTATCTTTTAATGGATAAACTTAGTAGAATAGTAACGGAATATAACATAGATTTAGCATGGAA AGAATTAGAAGAATTGGAGAATTATCTATTAGAACTTAATAAGAAAAAAGAGGTTAAGGATGTTCAATTGGGGAAGAGTA TTGAAACTATCAGCGATATGAAAAAAATTTTGATCAATTATCTAGCTTCCATACAAGGTGAAGCCGATGAGGCGTTTCTT ATAATGAGGGACGAGGTGTTTAATTTAATTCTGGGTAATAATATATATGAGTTAAAAATTAATGGATTAAGCGATAATGA AAAGAAGTCCTCTGATAGTTTTAGACTTAGTAATGCGTTAAAATTGTTATTAGATGAGGAAGATAAAATAAGAAATAAGA AACTTATGGGCGAAGTTTTTACTATTAGTAAGGTAAAGGACAAAGAGGGAAGAATTATAAACGTTTTGATAAGTTTCGCT ACCGCTAAGGAAATATTGAATTTAAGGGAAAGCCCAAATATCTCAGTGAAGCTTTTGCGTAAAGTAGAGGATTTCTGCAT ATTCTTATCTGGTAGCACGTTATATGGAATGGTTTCTTGCAACGTTGAGTTGGATGTGAATTCAGTATATACATATAAGG GTGAGAATATCTTCGAAAAAATTAGTCAACCTTGA
Upstream 100 bases:
>100_bases AGTTTAAGATCTTAACAATTCGATTAAACTTCAGAAGTAAAGTTTATTTTAGTACATAAGTAGTTTAATCTTTTTAATCT ATCAACGCAAACTGTATTGT
Downstream 100 bases:
>100_bases CTCGTAAAGGCCACTGGAAGCTCAAAATCTTAGCTTTTGCTCCTACTTTAACATTTCCTTCAGCGTAACATAGTAATCCT CCTTCAATATTAGGAAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MAQTHEMLEKFLNNFLKLVIISELMNIDIDANNLDRLLKVSSDIAVDLSIGIARRKFGNDKTKKIKEGLSNAYLWLQSTP TTPELYYLLMDKLSRIVTEYNIDLAWKELEELENYLLELNKKKEVKDVQLGKSIETISDMKKILINYLASIQGEADEAFL IMRDEVFNLILGNNIYELKINGLSDNEKKSSDSFRLSNALKLLLDEEDKIRNKKLMGEVFTISKVKDKEGRIINVLISFA TAKEILNLRESPNISVKLLRKVEDFCIFLSGSTLYGMVSCNVELDVNSVYTYKGENIFEKISQP
Sequences:
>Translated_304_residues MAQTHEMLEKFLNNFLKLVIISELMNIDIDANNLDRLLKVSSDIAVDLSIGIARRKFGNDKTKKIKEGLSNAYLWLQSTP TTPELYYLLMDKLSRIVTEYNIDLAWKELEELENYLLELNKKKEVKDVQLGKSIETISDMKKILINYLASIQGEADEAFL IMRDEVFNLILGNNIYELKINGLSDNEKKSSDSFRLSNALKLLLDEEDKIRNKKLMGEVFTISKVKDKEGRIINVLISFA TAKEILNLRESPNISVKLLRKVEDFCIFLSGSTLYGMVSCNVELDVNSVYTYKGENIFEKISQP >Mature_303_residues AQTHEMLEKFLNNFLKLVIISELMNIDIDANNLDRLLKVSSDIAVDLSIGIARRKFGNDKTKKIKEGLSNAYLWLQSTPT TPELYYLLMDKLSRIVTEYNIDLAWKELEELENYLLELNKKKEVKDVQLGKSIETISDMKKILINYLASIQGEADEAFLI MRDEVFNLILGNNIYELKINGLSDNEKKSSDSFRLSNALKLLLDEEDKIRNKKLMGEVFTISKVKDKEGRIINVLISFAT AKEILNLRESPNISVKLLRKVEDFCIFLSGSTLYGMVSCNVELDVNSVYTYKGENIFEKISQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34854; Mature: 34723
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQTHEMLEKFLNNFLKLVIISELMNIDIDANNLDRLLKVSSDIAVDLSIGIARRKFGND CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHCCCC KTKKIKEGLSNAYLWLQSTPTTPELYYLLMDKLSRIVTEYNIDLAWKELEELENYLLELN HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC KKKEVKDVQLGKSIETISDMKKILINYLASIQGEADEAFLIMRDEVFNLILGNNIYELKI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEEEEE NGLSDNEKKSSDSFRLSNALKLLLDEEDKIRNKKLMGEVFTISKVKDKEGRIINVLISFA CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHH TAKEILNLRESPNISVKLLRKVEDFCIFLSGSTLYGMVSCNVELDVNSVYTYKGENIFEK HHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEEEECCEEEEECCCHHHHH ISQP HCCC >Mature Secondary Structure AQTHEMLEKFLNNFLKLVIISELMNIDIDANNLDRLLKVSSDIAVDLSIGIARRKFGND CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEHHHHHHHCCCC KTKKIKEGLSNAYLWLQSTPTTPELYYLLMDKLSRIVTEYNIDLAWKELEELENYLLELN HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC KKKEVKDVQLGKSIETISDMKKILINYLASIQGEADEAFLIMRDEVFNLILGNNIYELKI CCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCEEEEEE NGLSDNEKKSSDSFRLSNALKLLLDEEDKIRNKKLMGEVFTISKVKDKEGRIINVLISFA CCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCCCCEEEHHHHHH TAKEILNLRESPNISVKLLRKVEDFCIFLSGSTLYGMVSCNVELDVNSVYTYKGENIFEK HHHHHHHHCCCCCCHHHHHHHHHHHEEEEECCCEEEEEEEEEEEECCEEEEECCCHHHHH ISQP HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA