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The map label for this gene is 15898728

Identifier: 15898728

GI number: 15898728

Start: 1748470

End: 1748907

Strand: Reverse

Name: 15898728

Synonym: SSO1927

Alternate gene names: NA

Gene position: 1748907-1748470 (Counterclockwise)

Preceding gene: 15898731

Following gene: 15898726

Centisome position: 58.45

GC content: 42.24

Gene sequence:

>438_bases
GTGGAAAGACTACTGAGACCTAAGGAGGCTTGCCAACTTCTCGGCATTTCATACTCAACACTCCTACGGTGGATTAGAGA
AGGGAAAATAAGGGTAGTAACAACTGAAGGAGGGAAGTACAGGATACCTTACAGCGAGATTAAGAAGTACTTAGAGAGGA
GGGAAGAACCAAGAGCAGTAATTTACGCAAGAGTTTCATCAGCAGACCAGAAAGAGGACTTGGAGAGACAAATAAACTAT
CTCACGAATTACGCAACGGCAAAGGGTTACAAGGTAGTTGAAGTACTAAAAGATATTGCAAGCGGATTGAACACGCAAAG
GAAAGGATTGCTGAAGCTCTTCAAACTGGTTGAGGGAAGCTTCCGGTATAAAAACTTTTCCTTGAAAATCGAGCATAATT
CACACTACTTACGCAATGAAACCTGCTTTACTCACTAG

Upstream 100 bases:

>100_bases
ACATATTAGTTAAGTCTGAGTAATACAGACCTAACTGGGGCTGAATCCTTTTTCGTGTTAATAGAAATCTTTTTATATTC
ATTTATTATCAACCAATTTT

Downstream 100 bases:

>100_bases
CATCAAAGGGCTTATTATAATACAGCACAGCCCAAGTAATAACAGCCAACTTTCTAGCACACGCAACAATCAACTTCTTA
CCCCTAAGCCTACCCTTGTG

Product: transposon ISC1913 Orf1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MERLLRPKEACQLLGISYSTLLRWIREGKIRVVTTEGGKYRIPYSEIKKYLERREEPRAVIYARVSSADQKEDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNFSLKIEHNSHYLRNETCFTH

Sequences:

>Translated_145_residues
MERLLRPKEACQLLGISYSTLLRWIREGKIRVVTTEGGKYRIPYSEIKKYLERREEPRAVIYARVSSADQKEDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNFSLKIEHNSHYLRNETCFTH
>Mature_145_residues
MERLLRPKEACQLLGISYSTLLRWIREGKIRVVTTEGGKYRIPYSEIKKYLERREEPRAVIYARVSSADQKEDLERQINY
LTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGSFRYKNFSLKIEHNSHYLRNETCFTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 17078; Mature: 17078

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERLLRPKEACQLLGISYSTLLRWIREGKIRVVTTEGGKYRIPYSEIKKYLERREEPRAV
CCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHCCCCCEE
IYARVSSADQKEDLERQINYLTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGS
EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
FRYKNFSLKIEHNSHYLRNETCFTH
CEECCEEEEEECCCCEECCCCCCCC
>Mature Secondary Structure
MERLLRPKEACQLLGISYSTLLRWIREGKIRVVTTEGGKYRIPYSEIKKYLERREEPRAV
CCCCCCHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCEEECCHHHHHHHHHHCCCCCEE
IYARVSSADQKEDLERQINYLTNYATAKGYKVVEVLKDIASGLNTQRKGLLKLFKLVEGS
EEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
FRYKNFSLKIEHNSHYLRNETCFTH
CEECCEEEEEECCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]