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The map label for this gene is 15898129

Identifier: 15898129

GI number: 15898129

Start: 1112085

End: 1112411

Strand: Direct

Name: 15898129

Synonym: SSO1286

Alternate gene names: NA

Gene position: 1112085-1112411 (Clockwise)

Preceding gene: 15898128

Following gene: 15898130

Centisome position: 37.17

GC content: 44.34

Gene sequence:

>327_bases
ATGATTTTTAATTTTGCTCAAATCGGACAACGTCACGTGATCATCTCGTCGGCCGAGCTCGGAGGGATCAAGTCCGAGGC
CAACCCAACCCTTCTAAGCTACCTCGTTGCGAGCAAGGAGCTCTGGAAGTTCAAGACCAACAACTTGGTCGAGTCCTTCA
ACTCCCTCTTGGAAAGGAGGTTTAGTAAGTTTCACTCCCCTTGGAGGATACTCCAGATCGCGCGGGCCATAGCCCTCTAC
TACAACCTATTGACCTATTTTCTCACTATTATAATAATATTACAATTACCTTCATTTCTCTCAATTTCACAGAAATATAT
CCAATAA

Upstream 100 bases:

>100_bases
TCGTACAATTATCTGTATTTTCCCTTATTAATACATATTATATTATTCTTTATACTTGAATATAATGAAGAATAGTATAA
TCTGAAATGCTGTAATTATA

Downstream 100 bases:

>100_bases
TTTATACATTGAATAAATGAAATTCAGAGTCAGAAGATACAATTCGCAATGGACTCCTGAATCGCTCGCTAAGCAGAAGT
TAAGATAAAATTTATTTATA

Product: partial transposase ISC1250

Products: NA

Alternate protein names: Partial Transposase ISC

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIFNFAQIGQRHVIISSAELGGIKSEANPTLLSYLVASKELWKFKTNNLVESFNSLLERRFSKFHSPWRILQIARAIALY
YNLLTYFLTIIIILQLPSFLSISQKYIQ

Sequences:

>Translated_108_residues
MIFNFAQIGQRHVIISSAELGGIKSEANPTLLSYLVASKELWKFKTNNLVESFNSLLERRFSKFHSPWRILQIARAIALY
YNLLTYFLTIIIILQLPSFLSISQKYIQ
>Mature_108_residues
MIFNFAQIGQRHVIISSAELGGIKSEANPTLLSYLVASKELWKFKTNNLVESFNSLLERRFSKFHSPWRILQIARAIALY
YNLLTYFLTIIIILQLPSFLSISQKYIQ

Specific function: Unknown

COG id: COG3328

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12540; Mature: 12540

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFNFAQIGQRHVIISSAELGGIKSEANPTLLSYLVASKELWKFKTNNLVESFNSLLERR
CCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKFHSPWRILQIARAIALYYNLLTYFLTIIIILQLPSFLSISQKYIQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MIFNFAQIGQRHVIISSAELGGIKSEANPTLLSYLVASKELWKFKTNNLVESFNSLLERR
CCCCHHHCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKFHSPWRILQIARAIALYYNLLTYFLTIIIILQLPSFLSISQKYIQ
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA