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The map label for this gene is 15898128

Identifier: 15898128

GI number: 15898128

Start: 1111496

End: 1111933

Strand: Direct

Name: 15898128

Synonym: SSO1285

Alternate gene names: NA

Gene position: 1111496-1111933 (Clockwise)

Preceding gene: 15898127

Following gene: 15898129

Centisome position: 37.15

GC content: 42.69

Gene sequence:

>438_bases
ATGAGATTCAATGACGTTTTTCTCCTCATGGGTTATACTACTTCCAAGCTCAAGAACTTCACGGCCTTTAGGAAGTATAA
GGGTAGTTGGGGTGGGAAGCACGGTAAGTCCTACTTCGGGTTTAAGGTCTGTAACCTTGTGGAAAGGAGGACTAATTTCG
TTAGGGACTTCAAGGTTGGATTGTTGAGTGATCTAGCCTTTTCATTTGATAACGTTAAGTTAATGGCTGATAGGGCTTGG
ATTTCCAAGAAGGACGTCTTAGTTAAGGGTGTTGGTAGTGCTAGGCTTCCGGTTGAGGGTAGTGGTGTTAAGATTAGGGA
AGGTAAGGCTTCGTCTACAACTTTAAGGGGAGTGGTTATGGAGGTATTCTTCCTTAACTTCTATCGTGATCTCGAAATTC
TTTCGACGAGGATTAGGACGAAGGTATTCGTTAATTAA

Upstream 100 bases:

>100_bases
CGAGGACTACCACATAATTGATACATTCTTCCGTGAGGCCTACCCCGGAAAGAGGAGTCTTCAAAACGGTCTTGAGAAGA
TCTCACTTGACCTTAAGGAG

Downstream 100 bases:

>100_bases
CGAGGTTCGTTTACGTGTTTACTTGTTGTTATGGCAAATTTTATTGCAAAATCGTACAATTATCTGTATTTTCCCTTATT
AATACATATTATATTATTCT

Product: second ORF in transposon ISC1212

Products: NA

Alternate protein names: ORF2 In Transposon ISC; Partial Transposase In ISC

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MRFNDVFLLMGYTTSKLKNFTAFRKYKGSWGGKHGKSYFGFKVCNLVERRTNFVRDFKVGLLSDLAFSFDNVKLMADRAW
ISKKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVFVN

Sequences:

>Translated_145_residues
MRFNDVFLLMGYTTSKLKNFTAFRKYKGSWGGKHGKSYFGFKVCNLVERRTNFVRDFKVGLLSDLAFSFDNVKLMADRAW
ISKKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVFVN
>Mature_145_residues
MRFNDVFLLMGYTTSKLKNFTAFRKYKGSWGGKHGKSYFGFKVCNLVERRTNFVRDFKVGLLSDLAFSFDNVKLMADRAW
ISKKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVMEVFFLNFYRDLEILSTRIRTKVFVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16571; Mature: 16571

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNDVFLLMGYTTSKLKNFTAFRKYKGSWGGKHGKSYFGFKVCNLVERRTNFVRDFKVG
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLSDLAFSFDNVKLMADRAWISKKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVM
HHHHHHHCCCCEEEEECCHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
EVFFLNFYRDLEILSTRIRTKVFVN
HHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MRFNDVFLLMGYTTSKLKNFTAFRKYKGSWGGKHGKSYFGFKVCNLVERRTNFVRDFKVG
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LLSDLAFSFDNVKLMADRAWISKKDVLVKGVGSARLPVEGSGVKIREGKASSTTLRGVVM
HHHHHHHCCCCEEEEECCHHCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCHHHHHHHH
EVFFLNFYRDLEILSTRIRTKVFVN
HHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA