Click here to switch to the map view.

The map label for this gene is mhqR [H]

Identifier: 15897948

GI number: 15897948

Start: 940121

End: 940585

Strand: Reverse

Name: mhqR [H]

Synonym: SSO1082

Alternate gene names: 15897948

Gene position: 940585-940121 (Counterclockwise)

Preceding gene: 15897950

Following gene: 15897944

Centisome position: 31.43

GC content: 33.55

Gene sequence:

>465_bases
GTGATGATGAAAAACTTTATTGTTTATAAAGTTAGATATCTAACTATGATATTAGCTACAAAGTACTCAGAAGTTTGGGA
TCTAATAACTGGACTGACAAGAAAGATAAATAAGGATACAGATAAGGCTCTTGAGCAAATAGGCCTATCATACTTTGAGT
TCAAAGTAATGTGTGCGCTAGAGGAAGAAGGAAAAGTTCCAATGAGCAGAATAGCTGAAAAATATATGCTGACAAAGGCG
GGATTAACTAGCATCATTGATAGACTTGAAGAGAAAGAACTTGTTAGAAGGGTAAGAAGTGAAAGTGATAGAAGGGTAAT
TTATGTTGAACTCACAGAAAAAGGAAGAGAACGATTAATGGAAAGTAGGAAGATCTTCTTAAATGTCTTATCTTCTTTTC
TAAGCAAATTGTCAGAAGATGAAATAAGAGAACTGGAGAGACTCTTTAGTAAGCTTTTTTCCTAA

Upstream 100 bases:

>100_bases
CCTCCTCCACTCAAAATTAGGATATAATTCTCGTTTACGAGAAGAGAGAATGAAGACGTAATATAAATATTTCCTTTTAG
ATAGGATTTTGTGAGTTTTT

Downstream 100 bases:

>100_bases
CTACTCGTATCTTAAAGCTTTATTTGGATCTAGTTTGGATGCATTGTAAGCAGGTCCTAGTGCTGCAATGACGCTTAGAA
TTGTAGAAAATATTAGCACT

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MMMKNFIVYKVRYLTMILATKYSEVWDLITGLTRKINKDTDKALEQIGLSYFEFKVMCALEEEGKVPMSRIAEKYMLTKA
GLTSIIDRLEEKELVRRVRSESDRRVIYVELTEKGRERLMESRKIFLNVLSSFLSKLSEDEIRELERLFSKLFS

Sequences:

>Translated_154_residues
MMMKNFIVYKVRYLTMILATKYSEVWDLITGLTRKINKDTDKALEQIGLSYFEFKVMCALEEEGKVPMSRIAEKYMLTKA
GLTSIIDRLEEKELVRRVRSESDRRVIYVELTEKGRERLMESRKIFLNVLSSFLSKLSEDEIRELERLFSKLFS
>Mature_154_residues
MMMKNFIVYKVRYLTMILATKYSEVWDLITGLTRKINKDTDKALEQIGLSYFEFKVMCALEEEGKVPMSRIAEKYMLTKA
GLTSIIDRLEEKELVRRVRSESDRRVIYVELTEKGRERLMESRKIFLNVLSSFLSKLSEDEIRELERLFSKLFS

Specific function: Negatively regulates mhqA, mhqED, mhqNOP, and azoR2 which may contribute to the degradation of aromatic compounds [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 18268; Mature: 18268

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKNFIVYKVRYLTMILATKYSEVWDLITGLTRKINKDTDKALEQIGLSYFEFKVMCAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHH
EEEGKVPMSRIAEKYMLTKAGLTSIIDRLEEKELVRRVRSESDRRVIYVELTEKGRERLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH
ESRKIFLNVLSSFLSKLSEDEIRELERLFSKLFS
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMMKNFIVYKVRYLTMILATKYSEVWDLITGLTRKINKDTDKALEQIGLSYFEFKVMCAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHH
EEEGKVPMSRIAEKYMLTKAGLTSIIDRLEEKELVRRVRSESDRRVIYVELTEKGRERLM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH
ESRKIFLNVLSSFLSKLSEDEIRELERLFSKLFS
HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]