Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889990
Identifier: 15889990
GI number: 15889990
Start: 2738082
End: 2739242
Strand: Direct
Name: 15889990
Synonym: Atu2741
Alternate gene names: NA
Gene position: 2738082-2739242 (Clockwise)
Preceding gene: 15889989
Following gene: 159185357
Centisome position: 96.36
GC content: 61.15
Gene sequence:
>1161_bases ATGACCGGCACAAGGTCCATCGACGCTACCGCAATTCTGCCTGACGATTTCGAAAACGCGCTGCTCGTCGGCCGCGTCTG GTCGAAAAGCGAAGGCGGGCCCTGCCCCGTGCTGCTCAAGGGCGGCGTGCTTTATGACCTCACCTCGCTTTCCCCCACCA TGTCCGAACTTCTGGAAAAGACGGATCTGGTGGAGCAGCTTGCCGTCACCAGCACCTTCGTCGCGCTCGGCGCGCTTGAC GCGTTTCTGGACGGTTCCGCTGGCGAGCTTCTTGCCCCCAACGACATTCAAGCCGTCAAGGCCGCCGGCGTCACCTTTGC CGACAGCATGCTGGAACGAGTGATCGAGGAGCAGGCCAAGGGTGATCCGCTGCGCGCGCAGGAAATCCGTGGACGGCTCG CTCCGGTTCTCGGCGACAATCTGAAGGGACTTGAGGCCGGTTCGGAAAAAGCCGCTGAAGTGAAGAAACTACTCCAGGAA ATGGGCCTCTGGTCGCAATATCTGGAAGTTGGTATCGGCCCGGATGCGGAAATCTTCTCCAAGGCGCAGGCTATGGCCTC CGTCGGCTGCGGCGCGCTGATCGGCGTTCACCCGAAATCGCAGTGGAACAACCCGGAGCCGGAAGTGGTGCTTGCCATCG CTTCCGATGGCCGCATCGTTGGCGCGACGCTCGGCAACGACGTCAACCTGCGCGATTTCGAAGGCCGCTCCGCCCTTCTG CTCAGCAAGGCGAAGGACAACAACGCATCCTGCGCGATCGGTCCTTTCATCCGCCTGTTCGACGGCAATTTCACCATTGA AGACGTGAAGAAGTCGCAGATCTCGCTTCTGGTCGAGGGCGAAGACGGTTTCACCATGACGGGCGTCAGCGCGATGCAGG CAATCAGCCGCACGCCGGAAAACCTTGCGTCCCAGCTCTTGAACCGCAACCATCAATATCCAGATGGCGCCGTCTTCTTC CTTGGCACGATGTTCGCGCCGGTCAAGGACCGCCATGGCCCGGGTCTCGGCTTCACCCACTCCAAGGGCGACCGCGTCGA AATCTCGACACCCAAGCTCGGCAAGCTGATCAACTGGGTAACGACGACTGACGAATGCCCGGAATGGACATTCGGCACCG TGGCCCTGATGCGCAACCTGGCGAAACGCGGACTGCTCTAG
Upstream 100 bases:
>100_bases GCCGCAAAAGTCATACTAAGAAGAATGAGATTAGGTTGTCAGACATCCAGACAATAAGACCGCAGGAGGCGGCCTGTGGG ATGCTGAAGGGGAGGACTAT
Downstream 100 bases:
>100_bases GCAATCCCGCAAAACCGCATTTCGGTTTTGCACCCAGAATTGCGAAAACCAATAGGTGGAGTATTGAAGGCGATCCTTCG CTGAAAATGCTCCAGATATT
Product: hypothetical protein
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MTGTRSIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEKTDLVEQLAVTSTFVALGALD AFLDGSAGELLAPNDIQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQE MGLWSQYLEVGIGPDAEIFSKAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRSALL LSKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISRTPENLASQLLNRNHQYPDGAVFF LGTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLINWVTTTDECPEWTFGTVALMRNLAKRGLL
Sequences:
>Translated_386_residues MTGTRSIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEKTDLVEQLAVTSTFVALGALD AFLDGSAGELLAPNDIQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQE MGLWSQYLEVGIGPDAEIFSKAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRSALL LSKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISRTPENLASQLLNRNHQYPDGAVFF LGTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLINWVTTTDECPEWTFGTVALMRNLAKRGLL >Mature_385_residues TGTRSIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEKTDLVEQLAVTSTFVALGALDA FLDGSAGELLAPNDIQAVKAAGVTFADSMLERVIEEQAKGDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQEM GLWSQYLEVGIGPDAEIFSKAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRSALLL SKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISRTPENLASQLLNRNHQYPDGAVFFL GTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLINWVTTTDECPEWTFGTVALMRNLAKRGLL
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41212; Mature: 41080
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGTRSIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEK CCCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHH TDLVEQLAVTSTFVALGALDAFLDGSAGELLAPNDIQAVKAAGVTFADSMLERVIEEQAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHC GDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQEMGLWSQYLEVGIGPDAEIFS CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH KAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRSALL HHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEECCCCCEEE LSKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISRTPE EEECCCCCCCEECCCEEEEECCCEEHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHCCHH NLASQLLNRNHQYPDGAVFFLGTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLINWV HHHHHHHHCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHH TTTDECPEWTFGTVALMRNLAKRGLL CCCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure TGTRSIDATAILPDDFENALLVGRVWSKSEGGPCPVLLKGGVLYDLTSLSPTMSELLEK CCCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHH TDLVEQLAVTSTFVALGALDAFLDGSAGELLAPNDIQAVKAAGVTFADSMLERVIEEQAK HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHC GDPLRAQEIRGRLAPVLGDNLKGLEAGSEKAAEVKKLLQEMGLWSQYLEVGIGPDAEIFS CCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCHHHHH KAQAMASVGCGALIGVHPKSQWNNPEPEVVLAIASDGRIVGATLGNDVNLRDFEGRSALL HHHHHHHCCCCEEEECCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCEECCCCCEEE LSKAKDNNASCAIGPFIRLFDGNFTIEDVKKSQISLLVEGEDGFTMTGVSAMQAISRTPE EEECCCCCCCEECCCEEEEECCCEEHHHHCCCEEEEEEECCCCCEEHHHHHHHHHHCCHH NLASQLLNRNHQYPDGAVFFLGTMFAPVKDRHGPGLGFTHSKGDRVEISTPKLGKLINWV HHHHHHHHCCCCCCCCHHHHHHHHHCCHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHH TTTDECPEWTFGTVALMRNLAKRGLL CCCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA