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The map label for this gene is uxuR [H]

Identifier: 15889989

GI number: 15889989

Start: 2737162

End: 2737878

Strand: Direct

Name: uxuR [H]

Synonym: Atu2740

Alternate gene names: 15889989

Gene position: 2737162-2737878 (Clockwise)

Preceding gene: 159185356

Following gene: 15889990

Centisome position: 96.33

GC content: 54.81

Gene sequence:

>717_bases
ATGACGCTGGAGTTCAATCAGATACATCGCAACGATCATCTGCCCGGCCGTATCGCCGCGGAGATCGCTCGCGAGATCAA
TGATTCGCAGCTCGGGCCGGGTGACAGGCTGCCGACGGAACATGTGCTTGCAAAAACCTTCGGCGTCAGCCGTTCGGTCA
TTCGCGAGGCGATCGCGCAACTGCGCAACGAAGGTTTCGTTGAAACCCGGCAAGGGGTAGGCGCTTTTGTAACCGATCCG
CGGCAACGATTGTCGATCCGGATCGAGCAATCCACCCTGAACGATCCCGAAAACTTCCGAGACCTGATGCAACTTCGGAT
GTCGCTGGAGATCGATGCCGCAGGCCTTGCGGCATTACATCACAAACCCGAACATCTGGAAAAGTTCGACAAGGCCATTT
ACGGCATGCGCAATGCTATCGAATGGTCCAAGGACGGGGTCGAAGCTGATCTCGATTTCCATCGCACCATGGCGCAAGCC
ACCGGTAATGAATATTTCCTGATTTTTCTTGGCTTCATTGCCCAACGCATTAGTTCGGCCATCAATACCGCTTTTTCGCG
GGCCGTTTACGGCGAAATCCTGGAAATTACCATAAACGAGCATGTCGTGCTGCGGGACGCCATTGCATCGCGAAATGTTG
CGCTGGCGCGAGATGCCATGCGTCAGCACATTTTAGGCGCTGCCCGACGGCTGAACATTGATCTCGACATCTTCTGA

Upstream 100 bases:

>100_bases
GCGGTTTGAACACGCCGCCTTTGAAAACCCGCTGGCGGCGAAGGAGGAAGTCGCTGCCGCGGGAAAACGAACCAATCGTT
TCTGTGGAACGGGAGCAATC

Downstream 100 bases:

>100_bases
TCTTTGGACGCCGTTGGTATTGAAGCTATAGGACAGCTTTGCCGCATTTGTTGGATGGCGATGGCGAATAAGGCGAATTT
TTGTCTGATGCACCGCTAGA

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTLEFNQIHRNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQLRNEGFVETRQGVGAFVTDP
RQRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALHHKPEHLEKFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQA
TGNEYFLIFLGFIAQRISSAINTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNIDLDIF

Sequences:

>Translated_238_residues
MTLEFNQIHRNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQLRNEGFVETRQGVGAFVTDP
RQRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALHHKPEHLEKFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQA
TGNEYFLIFLGFIAQRISSAINTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNIDLDIF
>Mature_237_residues
TLEFNQIHRNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQLRNEGFVETRQGVGAFVTDPR
QRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALHHKPEHLEKFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQAT
GNEYFLIFLGFIAQRISSAINTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNIDLDIF

Specific function: Repressor for the uxuRBA operon [H]

COG id: COG2186

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790032, Length=221, Percent_Identity=28.5067873303167, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1789621, Length=211, Percent_Identity=26.0663507109005, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1786303, Length=210, Percent_Identity=30.4761904761905, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790780, Length=237, Percent_Identity=27.4261603375527, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI87082208, Length=216, Percent_Identity=28.7037037037037, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 26868; Mature: 26737

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEFNQIHRNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQ
CCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
LRNEGFVETRQGVGAFVTDPRQRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALH
HHHCCCHHHHCCCCCHHCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHC
HKPEHLEKFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQATGNEYFLIFLGFIAQRISSA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
INTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNIDLDIF
HHHHHHHHHHHHHHEEEECCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECC
>Mature Secondary Structure 
TLEFNQIHRNDHLPGRIAAEIAREINDSQLGPGDRLPTEHVLAKTFGVSRSVIREAIAQ
CCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHH
LRNEGFVETRQGVGAFVTDPRQRLSIRIEQSTLNDPENFRDLMQLRMSLEIDAAGLAALH
HHHCCCHHHHCCCCCHHCCHHHHHEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHC
HKPEHLEKFDKAIYGMRNAIEWSKDGVEADLDFHRTMAQATGNEYFLIFLGFIAQRISSA
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
INTAFSRAVYGEILEITINEHVVLRDAIASRNVALARDAMRQHILGAARRLNIDLDIF
HHHHHHHHHHHHHHEEEECCCEEEHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]