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The map label for this gene is ameR [C]

Identifier: 15889808

GI number: 15889808

Start: 2520165

End: 2520824

Strand: Direct

Name: ameR [C]

Synonym: Atu2549

Alternate gene names: 15889808

Gene position: 2520165-2520824 (Clockwise)

Preceding gene: 15889807

Following gene: 159185263

Centisome position: 88.69

GC content: 55.61

Gene sequence:

>660_bases
GTGAACAAAACGATTGATCAGGTGAGAAAGGGCGACAGGAAAAGTGACCTTCCCGTGCGGCGCCGGCCTCGCCGTTCCGC
CGAGGAAACCCGGCGGGACATTCTTGCCAAGGCCGAAGAGCTTTTCCGCGAGCGCGGTTTCAATGCGGTGGCGATTGCCG
ATATCGCCTCGGCACTGAACATGTCTCCCGCCAATGTCTTCAAACATTTCAGCTCGAAGAATGCGCTCGTCGATGCCATC
GGCTTCGGACAGATCGGCGTTTTTGAACGGCAGATCTGTCCGCTCGACAAGAGCCATGCGCCGCTTGACAGGTTGCGTCA
TCTTGCGCGCAACCTGATGGAGCAGCACCACCAGGATCTCAATAAAAATCCCTATGTCTTCGAGATGATCCTGATGACCG
CCAAGCAGGATATGAAATGCGGCGACTATTATAAGTCCGTCATCGCGAAACTCCTGGCGGAAATCATTCGGGACGGCGTC
GAGGCGGGGCTCTATATCGCCACCGACATTCCCGTGCTCGCGGAAACCGTGCTCCACGCCCTGACGAGCGTCATCCATCC
CGTCCTCATCGCACAGGAAGATATCGGCAATTTGGCAACACGTTGTGATCAACTCGTTGATTTAATCGATGCGGGATTAC
GCAATCCGCTTGCTAAGTGA

Upstream 100 bases:

>100_bases
ACGCATCACCGGACAGCGCTTCGTTCCCGACGATAGCGGCGAGACGCCGTTGGCGAGAGTACGCCGGAATCTGGAGCCGT
TCTTCCCCGGAGTCTGACCC

Downstream 100 bases:

>100_bases
CGATTCCCAATTTACGTCACCTTCTCGCAATTGCTTGCGAAGCGCATAAGCCTGCGCTTCTATGCGCGTGGCGGTCCGGA
CAGAATGAGCGAATCGGGTC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator Protein TetR Family; Transcriptional Regulator Protein; Regulatory Protein TetR

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MNKTIDQVRKGDRKSDLPVRRRPRRSAEETRRDILAKAEELFRERGFNAVAIADIASALNMSPANVFKHFSSKNALVDAI
GFGQIGVFERQICPLDKSHAPLDRLRHLARNLMEQHHQDLNKNPYVFEMILMTAKQDMKCGDYYKSVIAKLLAEIIRDGV
EAGLYIATDIPVLAETVLHALTSVIHPVLIAQEDIGNLATRCDQLVDLIDAGLRNPLAK

Sequences:

>Translated_219_residues
MNKTIDQVRKGDRKSDLPVRRRPRRSAEETRRDILAKAEELFRERGFNAVAIADIASALNMSPANVFKHFSSKNALVDAI
GFGQIGVFERQICPLDKSHAPLDRLRHLARNLMEQHHQDLNKNPYVFEMILMTAKQDMKCGDYYKSVIAKLLAEIIRDGV
EAGLYIATDIPVLAETVLHALTSVIHPVLIAQEDIGNLATRCDQLVDLIDAGLRNPLAK
>Mature_219_residues
MNKTIDQVRKGDRKSDLPVRRRPRRSAEETRRDILAKAEELFRERGFNAVAIADIASALNMSPANVFKHFSSKNALVDAI
GFGQIGVFERQICPLDKSHAPLDRLRHLARNLMEQHHQDLNKNPYVFEMILMTAKQDMKCGDYYKSVIAKLLAEIIRDGV
EAGLYIATDIPVLAETVLHALTSVIHPVLIAQEDIGNLATRCDQLVDLIDAGLRNPLAK

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24577; Mature: 24577

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTIDQVRKGDRKSDLPVRRRPRRSAEETRRDILAKAEELFRERGFNAVAIADIASALN
CCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
MSPANVFKHFSSKNALVDAIGFGQIGVFERQICPLDKSHAPLDRLRHLARNLMEQHHQDL
CCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NKNPYVFEMILMTAKQDMKCGDYYKSVIAKLLAEIIRDGVEAGLYIATDIPVLAETVLHA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH
LTSVIHPVLIAQEDIGNLATRCDQLVDLIDAGLRNPLAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNKTIDQVRKGDRKSDLPVRRRPRRSAEETRRDILAKAEELFRERGFNAVAIADIASALN
CCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHC
MSPANVFKHFSSKNALVDAIGFGQIGVFERQICPLDKSHAPLDRLRHLARNLMEQHHQDL
CCHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHC
NKNPYVFEMILMTAKQDMKCGDYYKSVIAKLLAEIIRDGVEAGLYIATDIPVLAETVLHA
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHH
LTSVIHPVLIAQEDIGNLATRCDQLVDLIDAGLRNPLAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA