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The map label for this gene is dppB [H]

Identifier: 15889782

GI number: 15889782

Start: 2485530

End: 2486549

Strand: Reverse

Name: dppB [H]

Synonym: Atu2517

Alternate gene names: 15889782

Gene position: 2486549-2485530 (Counterclockwise)

Preceding gene: 159185251

Following gene: 15889781

Centisome position: 87.51

GC content: 59.71

Gene sequence:

>1020_bases
GTGACATTGAACAAGCGCGTCAAAAGCATATCGTCGATACTGGGCAGCGTCATCCTGACGCTGTTCGGTTTGATGATCAT
CACCTTCATGATCGGGCGCGTCATGCCTGTCGATCCCGTCATCGCGGCGGTCGGCGACAACGCGCCTGAAGACGTCATCG
TGCGGGTTCGGGCGGAAATGGGTCTCGACCAGCCGCTGGTCGTGCAGTTCTTCCATTATGTCACGCAGGTTCTGCATGGT
GACTTCGGCAATTCGATCCTGACCCGCAATCCGGTCTGGATCGATATCAAGCGTGTTTTCCCGGCCACTTTCGAACTTGC
CACCGCAGCCCTCATTCTGGCGGCGTTGATCGGCATTCCGCTGGGTGTCTGGGCTGCCGTGAAGCAGGGCAAGCTGACCG
ACCAGGTGATCCGCGTCGTCTGCCTTGCCGGTCACTCCGTGCCCGTCTTCATGCTGGCGCTGATTTCGCTGCTGGTGTTT
TACGCCACGCTTGGCGTCGCGCCGGGACCGGGCCGGCAGGACATCATCTATGACGGCATGATCACGCAGGTCACCGGCCT
GATGACGGTCGATACGCTGCTTGCTGGCGACTGGGGTGCCTTTTACGATGCGGTTGCCCATATGGTGCAGCCGGTCTGCA
TTCTTGCCTATTTCAGCATGGCCTATATTACCCGCATGACGCGCGCCTTCATGATCGATGCGCTGAAGGGCGAATATGTC
ATCACCGCCCGTGCCAAGGGGCTTTCGGCCATGACCGTGATCTGGGGCCATGCTTTCCCCACGGTCGCCGTGCAGCTCGT
CACGGTTCTGGCGCTCACCTATGCCGGCCTTCTCGAAGGTGCCGTGGTAACGGAAACCGTCTTCAGCTGGCCGGGCCTCG
GCCAATACCTCACCGTCTCGCTGATGAACGCGGACATGAACCCCGTCGTCGGAGCAACCCTGTTGATCGGCATTATCTAT
GTCGGCCTCAACCTGCTTGCAGACGTGCTTTACCGAGTAATGGATCCCCGCGTTCGATGA

Upstream 100 bases:

>100_bases
TGTTCCAGACCACGAAGACGGCTGCCTTCCGCAAGGGCGTCTCCGGCTTTGAACTCGGCGTTCTCTCCGAGGGCAATTCC
TACCACGATGCGAAGAAAGC

Downstream 100 bases:

>100_bases
TGTTAGCTAATTTCAGAAACTGGGCGCTGGACGAGACGCCGCATTCCCGCACACAGGCTGCGTGGGGAAACCGGTATCGC
ATCTGGCTCAACCTCAAGTC

Product: ABC transporter, membrane spanning protein (dipeptide)

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MTLNKRVKSISSILGSVILTLFGLMIITFMIGRVMPVDPVIAAVGDNAPEDVIVRVRAEMGLDQPLVVQFFHYVTQVLHG
DFGNSILTRNPVWIDIKRVFPATFELATAALILAALIGIPLGVWAAVKQGKLTDQVIRVVCLAGHSVPVFMLALISLLVF
YATLGVAPGPGRQDIIYDGMITQVTGLMTVDTLLAGDWGAFYDAVAHMVQPVCILAYFSMAYITRMTRAFMIDALKGEYV
ITARAKGLSAMTVIWGHAFPTVAVQLVTVLALTYAGLLEGAVVTETVFSWPGLGQYLTVSLMNADMNPVVGATLLIGIIY
VGLNLLADVLYRVMDPRVR

Sequences:

>Translated_339_residues
MTLNKRVKSISSILGSVILTLFGLMIITFMIGRVMPVDPVIAAVGDNAPEDVIVRVRAEMGLDQPLVVQFFHYVTQVLHG
DFGNSILTRNPVWIDIKRVFPATFELATAALILAALIGIPLGVWAAVKQGKLTDQVIRVVCLAGHSVPVFMLALISLLVF
YATLGVAPGPGRQDIIYDGMITQVTGLMTVDTLLAGDWGAFYDAVAHMVQPVCILAYFSMAYITRMTRAFMIDALKGEYV
ITARAKGLSAMTVIWGHAFPTVAVQLVTVLALTYAGLLEGAVVTETVFSWPGLGQYLTVSLMNADMNPVVGATLLIGIIY
VGLNLLADVLYRVMDPRVR
>Mature_338_residues
TLNKRVKSISSILGSVILTLFGLMIITFMIGRVMPVDPVIAAVGDNAPEDVIVRVRAEMGLDQPLVVQFFHYVTQVLHGD
FGNSILTRNPVWIDIKRVFPATFELATAALILAALIGIPLGVWAAVKQGKLTDQVIRVVCLAGHSVPVFMLALISLLVFY
ATLGVAPGPGRQDIIYDGMITQVTGLMTVDTLLAGDWGAFYDAVAHMVQPVCILAYFSMAYITRMTRAFMIDALKGEYVI
TARAKGLSAMTVIWGHAFPTVAVQLVTVLALTYAGLLEGAVVTETVFSWPGLGQYLTVSLMNADMNPVVGATLLIGIIYV
GLNLLADVLYRVMDPRVR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789965, Length=329, Percent_Identity=40.7294832826748, Blast_Score=238, Evalue=5e-64,
Organism=Escherichia coli, GI1787761, Length=323, Percent_Identity=39.938080495356, Blast_Score=214, Evalue=6e-57,
Organism=Escherichia coli, GI1787053, Length=330, Percent_Identity=32.1212121212121, Blast_Score=167, Evalue=7e-43,
Organism=Escherichia coli, GI1789888, Length=317, Percent_Identity=29.9684542586751, Blast_Score=154, Evalue=1e-38,
Organism=Escherichia coli, GI1787497, Length=323, Percent_Identity=30.030959752322, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=31.8352059925094, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1788504, Length=295, Percent_Identity=25.4237288135593, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36658; Mature: 36527

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNKRVKSISSILGSVILTLFGLMIITFMIGRVMPVDPVIAAVGDNAPEDVIVRVRAEM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHC
GLDQPLVVQFFHYVTQVLHGDFGNSILTRNPVWIDIKRVFPATFELATAALILAALIGIP
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHH
LGVWAAVKQGKLTDQVIRVVCLAGHSVPVFMLALISLLVFYATLGVAPGPGRQDIIYDGM
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCH
ITQVTGLMTVDTLLAGDWGAFYDAVAHMVQPVCILAYFSMAYITRMTRAFMIDALKGEYV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITARAKGLSAMTVIWGHAFPTVAVQLVTVLALTYAGLLEGAVVTETVFSWPGLGQYLTVS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
LMNADMNPVVGATLLIGIIYVGLNLLADVLYRVMDPRVR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TLNKRVKSISSILGSVILTLFGLMIITFMIGRVMPVDPVIAAVGDNAPEDVIVRVRAEM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHC
GLDQPLVVQFFHYVTQVLHGDFGNSILTRNPVWIDIKRVFPATFELATAALILAALIGIP
CCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCEEEHHHHCCHHHHHHHHHHHHHHHHHHH
LGVWAAVKQGKLTDQVIRVVCLAGHSVPVFMLALISLLVFYATLGVAPGPGRQDIIYDGM
HHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCH
ITQVTGLMTVDTLLAGDWGAFYDAVAHMVQPVCILAYFSMAYITRMTRAFMIDALKGEYV
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
ITARAKGLSAMTVIWGHAFPTVAVQLVTVLALTYAGLLEGAVVTETVFSWPGLGQYLTVS
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH
LMNADMNPVVGATLLIGIIYVGLNLLADVLYRVMDPRVR
HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]