Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is yflP [H]
Identifier: 15889739
GI number: 15889739
Start: 2437809
End: 2438753
Strand: Direct
Name: yflP [H]
Synonym: Atu2469
Alternate gene names: 15889739
Gene position: 2437809-2438753 (Clockwise)
Preceding gene: 159185228
Following gene: 15889740
Centisome position: 85.79
GC content: 62.65
Gene sequence:
>945_bases GTGAAGCATTTTCTTATCGGCACATTCCTGGCAGGCGTGATCGCTCTTCCGGCGGTTGCAGCGGATTACACCATCATTGC CCCGGCCAATCCCGGCGGCGGCTGGGACCAGACCGCACGCTCGCTGCAGACCGTGCTGCAGGAAGAAGGCATTTCCAAGA GCGTTCAGGTGCAGAACGTACCGGGCGCCGGCGGCACCATCGGGCTTGCGCAGTTCGCCAGCCAGCAGAAGGGCAATCCG AACGCCCTCATCGTCGGCGGTTACGTGATGGTCGGCGCGATCCTCACCAACAACGCGCCCGTGACGCTGAAGGAAGTAAC ACCGATTGCTCGCCTGACCGGCGAATATGAAGCCATCGTTGTTCCGGCATCCTCGCCGCTGAAGACCATCGGCGACCTCG TCGACCAGCTGAAGAAGGACCCGGGCAGCGTTTCCTGGGGCGGCGGCTCCGCCGGCGGCACCGACCATATCGCCGTGGGC CTGATCGCCAAGGCGGCCGGCGTCGATCCGACCAAGATCAACTACATCGCCTATTCCGGCGGCGGCGAAGCGCTCGCCTC GATCCTCGGCTCGCAGGTCACGGCCGGCATTTCGAGCTATGGCGAATTCGAAAGCCAGGTCAAGGCCGGCACGCTGCGCC TGCTTGCCGTTTCCAGCGAAGAAAAGCTGGACGGTGTTGATGCACCGACGCTCAAGGAAAGCGGCCTTGATGTCGTCGTC CAGAACTGGCGCATGGTCGCCGCTCCTCCCGGCCTGACGCCGGAGCAGGAAAAGGCCGTCAATGCCGACATCGAAAAGCT GGTGAAATCCGCCAAGTGGCAGGAAACCCTGAAGACCAAGAGCTGGATGGACACCTATCTCGCCGGTGACGAATTCAAGG CGCAGCTCGCCAAGGACACCGACGCCACCGCCGCCATCCTCAAAGACATCGGACTGGTAAAATGA
Upstream 100 bases:
>100_bases CTCCGCGCTGCTGTGGCAGCGATGGATAAGCGCGTCCTGAAAGCCCCCCGCATAAACGAAAAACGACGCCCAAAAGGGCA TCCTGAGGAGGGTTTTCCAA
Downstream 100 bases:
>100_bases GCCAGGGTTCCAACCCTCTAGAGCATCAAAAGCGCCGCCCTGACTGGGCGGCGCTGGCGATCGCCGTCTTCCTCGTCATC ATCGCCTGCGTGATATTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MKHFLIGTFLAGVIALPAVAADYTIIAPANPGGGWDQTARSLQTVLQEEGISKSVQVQNVPGAGGTIGLAQFASQQKGNP NALIVGGYVMVGAILTNNAPVTLKEVTPIARLTGEYEAIVVPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVG LIAKAAGVDPTKINYIAYSGGGEALASILGSQVTAGISSYGEFESQVKAGTLRLLAVSSEEKLDGVDAPTLKESGLDVVV QNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDEFKAQLAKDTDATAAILKDIGLVK
Sequences:
>Translated_314_residues MKHFLIGTFLAGVIALPAVAADYTIIAPANPGGGWDQTARSLQTVLQEEGISKSVQVQNVPGAGGTIGLAQFASQQKGNP NALIVGGYVMVGAILTNNAPVTLKEVTPIARLTGEYEAIVVPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVG LIAKAAGVDPTKINYIAYSGGGEALASILGSQVTAGISSYGEFESQVKAGTLRLLAVSSEEKLDGVDAPTLKESGLDVVV QNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDEFKAQLAKDTDATAAILKDIGLVK >Mature_314_residues MKHFLIGTFLAGVIALPAVAADYTIIAPANPGGGWDQTARSLQTVLQEEGISKSVQVQNVPGAGGTIGLAQFASQQKGNP NALIVGGYVMVGAILTNNAPVTLKEVTPIARLTGEYEAIVVPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVG LIAKAAGVDPTKINYIAYSGGGEALASILGSQVTAGISSYGEFESQVKAGTLRLLAVSSEEKLDGVDAPTLKESGLDVVV QNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDEFKAQLAKDTDATAAILKDIGLVK
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 32466; Mature: 32466
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHFLIGTFLAGVIALPAVAADYTIIAPANPGGGWDQTARSLQTVLQEEGISKSVQVQNV CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PGAGGTIGLAQFASQQKGNPNALIVGGYVMVGAILTNNAPVTLKEVTPIARLTGEYEAIV CCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCEEHHHHCHHHHHCCCCEEEE VPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVGLIAKAAGVDPTKINYIAYSG EECCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC GGEALASILGSQVTAGISSYGEFESQVKAGTLRLLAVSSEEKLDGVDAPTLKESGLDVVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHCCCCCCCCHHHCCCEEEE QNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDEFKAQLAKDT ECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC DATAAILKDIGLVK HHHHHHHHHHCCCC >Mature Secondary Structure MKHFLIGTFLAGVIALPAVAADYTIIAPANPGGGWDQTARSLQTVLQEEGISKSVQVQNV CCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC PGAGGTIGLAQFASQQKGNPNALIVGGYVMVGAILTNNAPVTLKEVTPIARLTGEYEAIV CCCCCCHHHHHHHHHCCCCCCEEEECCHHHHHHHHCCCCCEEHHHHCHHHHHCCCCEEEE VPASSPLKTIGDLVDQLKKDPGSVSWGGGSAGGTDHIAVGLIAKAAGVDPTKINYIAYSG EECCCCHHHHHHHHHHHHCCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECC GGEALASILGSQVTAGISSYGEFESQVKAGTLRLLAVSSEEKLDGVDAPTLKESGLDVVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCCHHCCCCCCCCHHHCCCEEEE QNWRMVAAPPGLTPEQEKAVNADIEKLVKSAKWQETLKTKSWMDTYLAGDEFKAQLAKDT ECCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCC DATAAILKDIGLVK HHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9272861; 9384377 [H]