Click here to switch to the map view.

The map label for this gene is 15889662

Identifier: 15889662

GI number: 15889662

Start: 2361240

End: 2362232

Strand: Direct

Name: 15889662

Synonym: Atu2391

Alternate gene names: NA

Gene position: 2361240-2362232 (Clockwise)

Preceding gene: 15889661

Following gene: 159185191

Centisome position: 83.1

GC content: 58.11

Gene sequence:

>993_bases
ATGAAAATGAAACTTGCCTCCATACTTCTTGCCGGCGCGTCAGTCCTGACCGCATTCGGAGCTCAAGCCACCGACAAGAT
CACCCTGCAGCTGAAATGGGTGACCCAGGCGCAGTTCGCCGGTTATTATGTCGCCAAGGACAAGGGCTTTTATGAAGCGG
AAGGCCTTGATGTTGATATCAAGCCCGGCGGCCCGGATATTGCCCCCGCACAGGTTCTGGCCGGCGGTGGTGCTGACGTC
ATCGTCGACTGGATGCCGTCTGCACTGGCGACGCGCGAAAAGGGCGTGCCGCTCGTCAACATCGCCCAGCCGTTCAAGTC
GTCAGGCATGATGCTGACCTGCCTCAAGGAAACCGGCATCACCAAGCCGGAAGATTTCAAGGGCAAGACACTCGGCGTCT
GGTTCTTCGGCAATGAATATCCGTTCCTGTCGTGGATGGCGCACCTGAAAATCCCGACCACCGGCGGCGCGGATGGCGTT
ACCGTTCTGAAACAGGGCTTCAACGTCGATCCGCTGTTGCAGAAACAGGCCGCCTGCATTTCCACCATGACCTATAATGA
ATATTGGCAGGTCATCGATGCCGGCATCAAGCCGGAAGAACTCGTTACCTTCAAATATGAGGCCGAAGGCGTGGCGACGC
TGGAAGACGGGCTCTATGTTCTGGAAGACAAGCTCAAGGACGCCAAATTTAGGGAAGACTTGGTCAAATTCGTCCGCGCT
TCCATGAAGGGCTGGAAGTGGGCCGAAGAACACCCTGACGATGCCGCCGGTATCGTTCTCGAAAACGACGCCTCCGGCGC
CCAGACCGAAAAGCACCAGAAGCGCATGATGGGCGAAGTCGCCAAGCTCACCGCCGGCTCGAAGGGCGCACTCGACAAGG
CCGATTACGAGCGTACGGTAAAAACCCTGCTCGGCGGCGGCTCCGATCCTGTGATCACCAAGGAGCCGGCAGGCGCCTAT
ACGACCGAAATCACTGACGCGGCGCTGAAGTAG

Upstream 100 bases:

>100_bases
CGGCTTTTACGGTCTGGTGGCGCTCGCTGAGCGTGCCGTCACCTTCTGGCATCCGTCCGTCCGTGGGGGACGAACGTAAA
TAACGAAAAAGGGAACAGCG

Downstream 100 bases:

>100_bases
GCGAAGTGACGTCCGAATAATGGAGCGCGCGGGAGGTCCGCGCGTTCTGGTTTATGACTCGCATGAAGAGTGCCAATTCT
CCCGACGTCATCCTCGGGCC

Product: ABC transporter, substrate binding protein (nitrate/sulfonate/taurine/bicarbonate)

Products: NA

Alternate protein names: NMT1/THI5-Like Domain-Containing Protein; Diguanylate Cyclase; NMT1/THI5 Like Domain-Containing Protein; Histidine Kinase; ABC Transporter Periplasmic; Twin-Arginine Translocation Pathway Signal; NMT1/THI5 Like Family; GGDEF Domain-Containing Protein; Thiamine Biosynthesis Protein; NMT1/THI5-Like Protein; PAS Sensor Protein; Diguanylate Cyclase With Extracellular Sensor; NLPA Lipoprotein; PAS/PAC Sensor-Containg Diguanylate Cyclase; Secreted Protein; Nitrate/Sulfonate/Bicarbonate ABC Transporter; Diguanylate Cyclase/Phosphodiesterase; Nitrate/Sulfonate/Bicarbonate ABC Transporter Permease; Diguanylate Cyclase With PAS/PAC Sensor; Pyrimidine Biosynthesis; Pyrimidine Biosynthesis ; PAS/GGDEF Domain-Containing Protein; Signal Transduction Response Regulator; PAS/PAC Sensor Signal Transduction Histidine Kinase; Two-Component Sensor Histidine Kinase; ABC Transporter; Periplasmic-Component Of ABC Transporter; Sensory Box Histidine Kinase; Two-Component Sensor Protein; PasGgdef; PAS/PAC Sensor Hybrid Histidine Kinase; Two Domain Sensory Box Histidine Kinase; Nitrate/Sulfonate ABC Transporter; Diguanylate Cyclase Domain Protein; Sensory Transduction Histidine Kinase; NMT1/THI5-Ike Domain-Containing Protein; Membrane Lipoprotein Lipid Attachment Site; Thiamine Biosynthesis; PAS/PAC Sensor-Containing Diguanylate Cyclase; Exported Protein; NMT1/THI5 Like Protein; Multi-Sensor Signal Transduction Histidine Kinase

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDIKPGGPDIAPAQVLAGGGADV
IVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGITKPEDFKGKTLGVWFFGNEYPFLSWMAHLKIPTTGGADGV
TVLKQGFNVDPLLQKQAACISTMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRA
SMKGWKWAEEHPDDAAGIVLENDASGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTVKTLLGGGSDPVITKEPAGAY
TTEITDAALK

Sequences:

>Translated_330_residues
MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDIKPGGPDIAPAQVLAGGGADV
IVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGITKPEDFKGKTLGVWFFGNEYPFLSWMAHLKIPTTGGADGV
TVLKQGFNVDPLLQKQAACISTMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRA
SMKGWKWAEEHPDDAAGIVLENDASGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTVKTLLGGGSDPVITKEPAGAY
TTEITDAALK
>Mature_330_residues
MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDIKPGGPDIAPAQVLAGGGADV
IVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGITKPEDFKGKTLGVWFFGNEYPFLSWMAHLKIPTTGGADGV
TVLKQGFNVDPLLQKQAACISTMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRA
SMKGWKWAEEHPDDAAGIVLENDASGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTVKTLLGGGSDPVITKEPAGAY
TTEITDAALK

Specific function: Unknown

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35670; Mature: 35670

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDI
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHCEEEEECCCCCEECCCCEEEE
KPGGPDIAPAQVLAGGGADVIVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGI
CCCCCCCCHHHEEECCCCEEEEECCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHCCC
TKPEDFKGKTLGVWFFGNEYPFLSWMAHLKIPTTGGADGVTVLKQGFNVDPLLQKQAACI
CCCCCCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
STMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRA
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHCCEEEEHHHHHHHHHHHHHHHHHHH
SMKGWKWAEEHPDDAAGIVLENDASGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTV
HHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
KTLLGGGSDPVITKEPAGAYTTEITDAALK
HHHHCCCCCCEEECCCCCCEEHHHHHHHCC
>Mature Secondary Structure
MKMKLASILLAGASVLTAFGAQATDKITLQLKWVTQAQFAGYYVAKDKGFYEAEGLDVDI
CCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEHHHCEEEEECCCCCEECCCCEEEE
KPGGPDIAPAQVLAGGGADVIVDWMPSALATREKGVPLVNIAQPFKSSGMMLTCLKETGI
CCCCCCCCHHHEEECCCCEEEEECCCHHHHHHHCCCCEEEECCCCCCCCEEEEEEHHCCC
TKPEDFKGKTLGVWFFGNEYPFLSWMAHLKIPTTGGADGVTVLKQGFNVDPLLQKQAACI
CCCCCCCCCEEEEEEECCCCCHHHHHEEEECCCCCCCCCHHHHHCCCCCCHHHHHHHHHH
STMTYNEYWQVIDAGIKPEELVTFKYEAEGVATLEDGLYVLEDKLKDAKFREDLVKFVRA
HHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEEHHCCEEEEHHHHHHHHHHHHHHHHHHH
SMKGWKWAEEHPDDAAGIVLENDASGAQTEKHQKRMMGEVAKLTAGSKGALDKADYERTV
HHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
KTLLGGGSDPVITKEPAGAYTTEITDAALK
HHHHCCCCCCEEECCCCCCEEHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA