Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is uao [H]
Identifier: 15889604
GI number: 15889604
Start: 2302066
End: 2302563
Strand: Reverse
Name: uao [H]
Synonym: Atu2327
Alternate gene names: 15889604
Gene position: 2302563-2302066 (Counterclockwise)
Preceding gene: 15889605
Following gene: 159185159
Centisome position: 81.03
GC content: 62.25
Gene sequence:
>498_bases ATGGTGACGCGCGAGGAATTTGTCGCCCGCTTCGGTGGCGTGTTCGAACATTCGCCTTTCATTGCCGAACGGGCCTATGA TGCTGGTGGCGCAGGCCTGGAACTGACGGCGAAGGCGGTTCACGGGGCCCTTTGCGCGCAGTTCCGGGTGGCTTCCGAGG CGGAAAGGCTCGGCGTTTTGCGGGCGCATCCCGATCTGGCCGGCAAGCTGGCGATTGCCGGCGAACTGACCGCCGACAGC CGCAACGAACAGGCCGGTGCCGGGCTCGATCGGCTTTCGCCGCAGGAACATGCACGGTTCACCCAACTGAACAGCGCCTA TACCGAAAAATTCGGTTTTCCCTTCATCATCGCCGTGAAGGGGCTGAACAGGCACGATATCCTCTCCGCTTTCGATACCC GCATCGACAACAACGCGGCGCAGGAATTCGCAACCGCAACGGGGCAGGTGGAAAAGATCGCCTGGCTGCGCCTTGCCTCT ATGCTGCCGGAAGGCTGA
Upstream 100 bases:
>100_bases GTTTCATCGAATATGTGCTTGGTCACGAGAAGGTGTGGATTCCGCAGCGCCTCGAGATCGCCCGCCACTGGCATGAACAC CACAAGCCGGAGACGCCTTA
Downstream 100 bases:
>100_bases ATTGGCGAGTGCAGGCCGTTCTGCTAGGATCGCGCCGTCTGGAGATAAAGATCATGCGACCGTCCGAGGTGCTGGAAAAG AACAGGGAGGCGATCCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; OHCU decarboxylase; Uricase; Urate oxidase [H]
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MVTREEFVARFGGVFEHSPFIAERAYDAGGAGLELTAKAVHGALCAQFRVASEAERLGVLRAHPDLAGKLAIAGELTADS RNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFIIAVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWLRLAS MLPEG
Sequences:
>Translated_165_residues MVTREEFVARFGGVFEHSPFIAERAYDAGGAGLELTAKAVHGALCAQFRVASEAERLGVLRAHPDLAGKLAIAGELTADS RNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFIIAVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWLRLAS MLPEG >Mature_165_residues MVTREEFVARFGGVFEHSPFIAERAYDAGGAGLELTAKAVHGALCAQFRVASEAERLGVLRAHPDLAGKLAIAGELTADS RNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFIIAVKGLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWLRLAS MLPEG
Specific function: Catalyzes two steps in the degradation of uric acid, i.e. the oxidation of uric acid to 5-hydroxyisourate (HIU) and the stereoselective decarboxylation of 2-oxo-4-hydroxy-4-carboxy-5- ureidoimidazoline (OHCU) to (S)-allantoin [H]
COG id: COG3195
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the uricase family [H]
Homologues:
Organism=Homo sapiens, GI157743280, Length=158, Percent_Identity=39.2405063291139, Blast_Score=96, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018020 - InterPro: IPR017580 - InterPro: IPR002042 - InterPro: IPR019842 [H]
Pfam domain/function: PF09349 OHCU_decarbox; PF01014 Uricase [H]
EC number: =1.7.3.3 [H]
Molecular weight: Translated: 17814; Mature: 17814
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTREEFVARFGGVFEHSPFIAERAYDAGGAGLELTAKAVHGALCAQFRVASEAERLGVL CCCHHHHHHHHCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAHPDLAGKLAIAGELTADSRNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFIIAVK CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE GLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWLRLASMLPEG CCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MVTREEFVARFGGVFEHSPFIAERAYDAGGAGLELTAKAVHGALCAQFRVASEAERLGVL CCCHHHHHHHHCCHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAHPDLAGKLAIAGELTADSRNEQAGAGLDRLSPQEHARFTQLNSAYTEKFGFPFIIAVK CCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE GLNRHDILSAFDTRIDNNAAQEFATATGQVEKIAWLRLASMLPEG CCCHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8907179 [H]