Click here to switch to the map view.

The map label for this gene is allA

Identifier: 15889601

GI number: 15889601

Start: 2300856

End: 2301356

Strand: Reverse

Name: allA

Synonym: Atu2324

Alternate gene names: 15889601

Gene position: 2301356-2300856 (Counterclockwise)

Preceding gene: 159185158

Following gene: 15889600

Centisome position: 80.99

GC content: 59.48

Gene sequence:

>501_bases
TTGACTGATTTTCTCGAGATACGGCCTCTCACCAAAGAGGCGTTCACACCCTTCGGTGATGTGATTGAAACGACACCCTC
TTCCATGCGCCACATCAATGGTGGCCAGACCGAGCGGCATCATGCGCTTTCAGCGCCAGAGGCTGCGGGCGAGGGCGCGC
GGATCATTCTCAACATCTTCCGTGGTCAGCCCCGGGTTTTCCCGCACAAGATCGACATGATGGAGCGGCATCCGCTCGGC
AGCCAGAGTTTTTCGCCGCTTTCCGGCCGGCCGTTCCTCGTTGTCGTTGCGCAAGATGACGGTGGCCGGCCCGCCAGGCC
GCAGGTGTTTCTGGCGCGGGGCGATCAGGGCGTGAATTACCGTCGCAATGTCTGGCATTATCCGCTGATGCCGCTGCAGG
CGGTTTCGGATTTTCTGGTTGCCGATCGCGAGGGGCCGGGTAACAATCTGGAAGAGTATTTTTTCGATGAGCCCTTCATG
ATCGCGGAGCCCAGCCTATGA

Upstream 100 bases:

>100_bases
CAATCTGGAAACGGTCTGGGATACGACCCAGACGGCGATACCTGACCTTCTGGACAAACTCTCTCTTCTGCACAATTGGC
ATGCCCAAGGTGAATGACAT

Downstream 100 bases:

>100_bases
CCGGTTTGACCACTCATGTCCTCGATGCCGCGCATGGGGTGCCCGCTGAGGGGCTGACGATCGAGCTTTACCGGCTCTCC
GGTGATCGCCGCGAGAAGCT

Product: ureidoglycolate hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTDFLEIRPLTKEAFTPFGDVIETTPSSMRHINGGQTERHHALSAPEAAGEGARIILNIFRGQPRVFPHKIDMMERHPLG
SQSFSPLSGRPFLVVVAQDDGGRPARPQVFLARGDQGVNYRRNVWHYPLMPLQAVSDFLVADREGPGNNLEEYFFDEPFM
IAEPSL

Sequences:

>Translated_166_residues
MTDFLEIRPLTKEAFTPFGDVIETTPSSMRHINGGQTERHHALSAPEAAGEGARIILNIFRGQPRVFPHKIDMMERHPLG
SQSFSPLSGRPFLVVVAQDDGGRPARPQVFLARGDQGVNYRRNVWHYPLMPLQAVSDFLVADREGPGNNLEEYFFDEPFM
IAEPSL
>Mature_165_residues
TDFLEIRPLTKEAFTPFGDVIETTPSSMRHINGGQTERHHALSAPEAAGEGARIILNIFRGQPRVFPHKIDMMERHPLGS
QSFSPLSGRPFLVVVAQDDGGRPARPQVFLARGDQGVNYRRNVWHYPLMPLQAVSDFLVADREGPGNNLEEYFFDEPFMI
AEPSL

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Reinforces The Induction Of Genes Involved In The Degradation Of Allantoin And Glyoxylate By Producing Glyoxylate. [C]

COG id: COG3194

COG function: function code F; Ureidoglycolate hydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureidoglycolate hydrolase family

Homologues:

Organism=Escherichia coli, GI1786714, Length=145, Percent_Identity=46.8965517241379, Blast_Score=133, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ALLA_AGRT5 (Q8UD04)

Other databases:

- EMBL:   AE007869
- PIR:   AC2862
- PIR:   B97639
- RefSeq:   NP_355282.1
- ProteinModelPortal:   Q8UD04
- SMR:   Q8UD04
- STRING:   Q8UD04
- GeneID:   1134362
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu2324
- eggNOG:   COG3194
- HOGENOM:   HBG289179
- OMA:   SQAFIPM
- PhylomeDB:   Q8UD04
- ProtClustDB:   PRK03606
- BioCyc:   ATUM176299-1:ATU2324-MONOMER
- HAMAP:   MF_00616
- InterPro:   IPR011051
- InterPro:   IPR007247
- PANTHER:   PTHR21221
- PIRSF:   PIRSF017306

Pfam domain/function: PF04115 Ureidogly_hydro; SSF51182 RmlC_like_cupin

EC number: =3.5.3.19

Molecular weight: Translated: 18643; Mature: 18512

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDFLEIRPLTKEAFTPFGDVIETTPSSMRHINGGQTERHHALSAPEAAGEGARIILNIF
CCCCCCCCCCCHHHCCCCHHHHHCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCEEEEEEC
RGQPRVFPHKIDMMERHPLGSQSFSPLSGRPFLVVVAQDDGGRPARPQVFLARGDQGVNY
CCCCCCCCHHHCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCC
RRNVWHYPLMPLQAVSDFLVADREGPGNNLEEYFFDEPFMIAEPSL
CCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCC
>Mature Secondary Structure 
TDFLEIRPLTKEAFTPFGDVIETTPSSMRHINGGQTERHHALSAPEAAGEGARIILNIF
CCCCCCCCCCHHHCCCCHHHHHCCCHHHHHCCCCCCCCHHCCCCCCCCCCCCEEEEEEC
RGQPRVFPHKIDMMERHPLGSQSFSPLSGRPFLVVVAQDDGGRPARPQVFLARGDQGVNY
CCCCCCCCHHHCHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCC
RRNVWHYPLMPLQAVSDFLVADREGPGNNLEEYFFDEPFMIAEPSL
CCCEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194