Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is parA [H]
Identifier: 15889417
GI number: 15889417
Start: 2101656
End: 2102372
Strand: Reverse
Name: parA [H]
Synonym: Atu2136
Alternate gene names: 15889417
Gene position: 2102372-2101656 (Counterclockwise)
Preceding gene: 15889418
Following gene: 159185067
Centisome position: 73.99
GC content: 57.32
Gene sequence:
>717_bases ATGTCAGTCATCACTTTTGCCAATACCAAGGGCGGGGCCGGGAAAACCACGGCCGTGCTGCTTCTGGCAACCGAACTGGC CCGCAGCGGCCATCGCGTCACGGTTCTGGATGCCGATCCGCAATTGTGGATTTCGCGCTGGCACGAATTATCAGGCGAGA TCGAAAATCTCTCGGTGATTTCGCATGTGACGATTGCCTCGCTTGAGGGCCATATTCGCGAGAATAAAACAAATACCGAC TGTTTCATCATCGACCTGCCGGGTGCGAAAACGCCGCTTCTGACCATGGCGCTCGGTATCTCCGATCATGTTCTGATCCC CGTTCAGGGCTCTGCCATGGATGCGCGGGGTGCTGCAGAAGTGCTCGATCACATCGAATTCCTGAACCGCAGGATGGGCA AGGAGATTGCCCATTCCATCGTGCTGACGCGGGTCAACGCCATGGTGGCGACGCGTTCGCTGCTGCTCGTCAAGATGCTG CTGGCGGAAAAGAACGTCTCCGTGCTCAATACGGCGATCGTCGAGCGGGCGGCCTATCGTGATATTTTCGACTATGGCGG CACGCTCCTCTGTCTGGACTGCAAGAAGGTCAGCAATATCGACAAGGCGGTCGAAAACGCGACGGCCTTTGCCGAGGAAG TCATCAAGCTCCTGCCGAAAAGACTTCCGAGGCGTGTTGCGCACCTAGCACGTCTCGTGACGCGCAAAGCTGCCTGA
Upstream 100 bases:
>100_bases TTAGCTTTTTGTTAACCCTGTTCGTTAAGATTGTGGAAAGCACCATGAAGGCGTCGGTGCGTGAATGAGCATGAAATGGC TCTGACCAACAGGGGGCATC
Downstream 100 bases:
>100_bases CCCCACCTTGCGATTTCCGGCTGGTTGCAGCGACGTTGCCGCGGTTGGATAAAATGGGCACCCCCCCAAATTGCTGAGGA GAGGCGTCGTTATGAGGCGC
Product: chromosome partitioning protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSVITFANTKGGAGKTTAVLLLATELARSGHRVTVLDADPQLWISRWHELSGEIENLSVISHVTIASLEGHIRENKTNTD CFIIDLPGAKTPLLTMALGISDHVLIPVQGSAMDARGAAEVLDHIEFLNRRMGKEIAHSIVLTRVNAMVATRSLLLVKML LAEKNVSVLNTAIVERAAYRDIFDYGGTLLCLDCKKVSNIDKAVENATAFAEEVIKLLPKRLPRRVAHLARLVTRKAA
Sequences:
>Translated_238_residues MSVITFANTKGGAGKTTAVLLLATELARSGHRVTVLDADPQLWISRWHELSGEIENLSVISHVTIASLEGHIRENKTNTD CFIIDLPGAKTPLLTMALGISDHVLIPVQGSAMDARGAAEVLDHIEFLNRRMGKEIAHSIVLTRVNAMVATRSLLLVKML LAEKNVSVLNTAIVERAAYRDIFDYGGTLLCLDCKKVSNIDKAVENATAFAEEVIKLLPKRLPRRVAHLARLVTRKAA >Mature_237_residues SVITFANTKGGAGKTTAVLLLATELARSGHRVTVLDADPQLWISRWHELSGEIENLSVISHVTIASLEGHIRENKTNTDC FIIDLPGAKTPLLTMALGISDHVLIPVQGSAMDARGAAEVLDHIEFLNRRMGKEIAHSIVLTRVNAMVATRSLLLVKMLL AEKNVSVLNTAIVERAAYRDIFDYGGTLLCLDCKKVSNIDKAVENATAFAEEVIKLLPKRLPRRVAHLARLVTRKAA
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 25962; Mature: 25831
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVITFANTKGGAGKTTAVLLLATELARSGHRVTVLDADPQLWISRWHELSGEIENLSVI CCEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH SHVTIASLEGHIRENKTNTDCFIIDLPGAKTPLLTMALGISDHVLIPVQGSAMDARGAAE HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEEECCCCCCCCCHHH VLDHIEFLNRRMGKEIAHSIVLTRVNAMVATRSLLLVKMLLAEKNVSVLNTAIVERAAYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DIFDYGGTLLCLDCKKVSNIDKAVENATAFAEEVIKLLPKRLPRRVAHLARLVTRKAA HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVITFANTKGGAGKTTAVLLLATELARSGHRVTVLDADPQLWISRWHELSGEIENLSVI CEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHH SHVTIASLEGHIRENKTNTDCFIIDLPGAKTPLLTMALGISDHVLIPVQGSAMDARGAAE HHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEECCCCCEEEEECCCCCCCCCHHH VLDHIEFLNRRMGKEIAHSIVLTRVNAMVATRSLLLVKMLLAEKNVSVLNTAIVERAAYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH DIFDYGGTLLCLDCKKVSNIDKAVENATAFAEEVIKLLPKRLPRRVAHLARLVTRKAA HHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3586028 [H]