Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is folA [H]
Identifier: 15889333
GI number: 15889333
Start: 2005331
End: 2005858
Strand: Reverse
Name: folA [H]
Synonym: Atu2046
Alternate gene names: 15889333
Gene position: 2005858-2005331 (Counterclockwise)
Preceding gene: 159185026
Following gene: 159185025
Centisome position: 70.59
GC content: 57.58
Gene sequence:
>528_bases ATGAGTGAGCCGCGCGTCACCATCATCGTTGCGGTCTCCGAGAACGGCGTCATCGGCCGCGATCTCGACATGCCATGGAA GCTGTCGACCGATCTGAAGCGCTTCAAGGCGATGACGATGGGCAAGCCGCTCATCATGGGCCGCAAGACGTTTCTGTCTG TCGGCGAACGTCCCCTCCCGGGCCGTCCGCATATCATCGTCAGCCGAAATGCCGATTACCGGCCTGAAGGCGTCGACGTC GTTTCGTCGCTGGACGAGGCCGTGAAGCTTGCAAAAACGAAGGCTGTGGAACTGGGCGTGGACGAGGTTTTTGTCGCCGG CGGTGGCGAGATTTACCGTCAGGCCATGCCCTTTGCCGATCAACTTTCCGTCACCCATGTGGCGGTAAAACTCGATGGCG ACACTTTTTTTCCGGAAATTGATCCCGCCGTTTTTGAGAAAACCGAAGAAAAGGCCGCGTCCGCAGGGGAAAAGGACAAT TATCCGGTTCTGTTTACCACTTATGTGCGACGAGCCGCGGCAAAGTGA
Upstream 100 bases:
>100_bases GCCTCAACCCTGATGTGAAGAACCTTTTCGGCTTTAAGTTCGAGGACTTTACGCTGGAGAATTACGAGGCCGATTCAAGC ATCAAGGCACCGATCGCGGT
Downstream 100 bases:
>100_bases ACTATTTACCTCGATTGGGTATTTAGTTACCACCTCTGCGTTGAAACAGGCGCTTCTCCTTCCTATAACGGGTCGATATT CCCGCCGCACGCGAGCAATC
Product: dihydrofolate reductase
Products: NA
Alternate protein names: Dihydrofolate reductase type III [H]
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSEPRVTIIVAVSENGVIGRDLDMPWKLSTDLKRFKAMTMGKPLIMGRKTFLSVGERPLPGRPHIIVSRNADYRPEGVDV VSSLDEAVKLAKTKAVELGVDEVFVAGGGEIYRQAMPFADQLSVTHVAVKLDGDTFFPEIDPAVFEKTEEKAASAGEKDN YPVLFTTYVRRAAAK
Sequences:
>Translated_175_residues MSEPRVTIIVAVSENGVIGRDLDMPWKLSTDLKRFKAMTMGKPLIMGRKTFLSVGERPLPGRPHIIVSRNADYRPEGVDV VSSLDEAVKLAKTKAVELGVDEVFVAGGGEIYRQAMPFADQLSVTHVAVKLDGDTFFPEIDPAVFEKTEEKAASAGEKDN YPVLFTTYVRRAAAK >Mature_174_residues SEPRVTIIVAVSENGVIGRDLDMPWKLSTDLKRFKAMTMGKPLIMGRKTFLSVGERPLPGRPHIIVSRNADYRPEGVDVV SSLDEAVKLAKTKAVELGVDEVFVAGGGEIYRQAMPFADQLSVTHVAVKLDGDTFFPEIDPAVFEKTEEKAASAGEKDNY PVLFTTYVRRAAAK
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=149, Percent_Identity=40.2684563758389, Blast_Score=97, Evalue=9e-21, Organism=Homo sapiens, GI28827793, Length=149, Percent_Identity=36.9127516778523, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1786233, Length=168, Percent_Identity=38.0952380952381, Blast_Score=110, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17505899, Length=163, Percent_Identity=27.6073619631902, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI116008026, Length=150, Percent_Identity=36, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24647458, Length=150, Percent_Identity=36, Blast_Score=86, Evalue=1e-17,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 19197; Mature: 19066
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPRVTIIVAVSENGVIGRDLDMPWKLSTDLKRFKAMTMGKPLIMGRKTFLSVGERPLP CCCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHCCCCCCC GRPHIIVSRNADYRPEGVDVVSSLDEAVKLAKTKAVELGVDEVFVAGGGEIYRQAMPFAD CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHCCCHH QLSVTHVAVKLDGDTFFPEIDPAVFEKTEEKAASAGEKDNYPVLFTTYVRRAAAK HCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCC >Mature Secondary Structure SEPRVTIIVAVSENGVIGRDLDMPWKLSTDLKRFKAMTMGKPLIMGRKTFLSVGERPLP CCCCEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHCCCCCCC GRPHIIVSRNADYRPEGVDVVSSLDEAVKLAKTKAVELGVDEVFVAGGGEIYRQAMPFAD CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEEEECCHHHHHHHCCCHH QLSVTHVAVKLDGDTFFPEIDPAVFEKTEEKAASAGEKDNYPVLFTTYVRRAAAK HCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840679; 6371010 [H]