Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889112
Identifier: 15889112
GI number: 15889112
Start: 1792062
End: 1792367
Strand: Direct
Name: 15889112
Synonym: Atu1810
Alternate gene names: NA
Gene position: 1792062-1792367 (Clockwise)
Preceding gene: 159184927
Following gene: 159184928
Centisome position: 63.07
GC content: 56.21
Gene sequence:
>306_bases ATGTCTGCGAAGATTTACCGCCCTGCAAAAACCGCCATGCAATCCGGCACGGCAAAGACCAATGTCTGGGTTCTGGAATT CGACGCCGAAGTTCCGCGCAAGATCGATCCGATCATGGGCTACACCTCCAGTTCCGACATGAAGCAGCAGGTCAAGCTGA CATTCGAGACGCAGGAACAGGCCGAAGCCTATGCACAGCGCAAGGGCATCGAATACCGCGTCATCCTGCCGAAGGAAGCA ACCCGCAAGGTGGTTTCCTACACCGACAATTTCCGTTTCAACCGCACCCAGCCCTGGACGCACTGA
Upstream 100 bases:
>100_bases AAATTCAACGTTCCTGACACGATTTGGTTATTCTATTCAGGTACGTGAAGAATAATTCGGGGATGTAAACACCCCACTGT CCAACCGGAGCAGTTTCGAC
Downstream 100 bases:
>100_bases AACACTATAGTTTTCGCCGGCAGCATCGCTGCCCGGCATGACGGCCCCTTAGCTCAACTGGATAGAGCAACTGCCTTCTA AGCAGTAGGTCGCAGGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; Oxidoreductase Protein; ETC Complex I Subunit Conserved Region Superfamily; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; NADH Dehydrogenase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADHUbiquinone Oxidoreductase; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MSAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEA TRKVVSYTDNFRFNRTQPWTH
Sequences:
>Translated_101_residues MSAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEA TRKVVSYTDNFRFNRTQPWTH >Mature_100_residues SAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQAEAYAQRKGIEYRVILPKEAT RKVVSYTDNFRFNRTQPWTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505369, Length=92, Percent_Identity=36.9565217391304, Blast_Score=63, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11736; Mature: 11605
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQ CCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHH AEAYAQRKGIEYRVILPKEATRKVVSYTDNFRFNRTQPWTH HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SAKIYRPAKTAMQSGTAKTNVWVLEFDAEVPRKIDPIMGYTSSSDMKQQVKLTFETQEQ CCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCHHH AEAYAQRKGIEYRVILPKEATRKVVSYTDNFRFNRTQPWTH HHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA