Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889110
Identifier: 15889110
GI number: 15889110
Start: 1790041
End: 1790310
Strand: Direct
Name: 15889110
Synonym: Atu8166
Alternate gene names: NA
Gene position: 1790041-1790310 (Clockwise)
Preceding gene: 159184925
Following gene: 159184927
Centisome position: 62.99
GC content: 56.3
Gene sequence:
>270_bases ATGCTGATCAACAGAACAGAGCCGTGTCACCACGCCTCGTGGATGAAACCGGTGGCCATCCACCTGCCGCTTTGCGTCGC CGTGGAGATCTACAGCCCGCTGGTGGCGCTCGACATGCTGATGTACCGCTGGCCCGAGGAACATGGGCCTGAATATGAAG AAGCGCGCAGAAACTGCCTCAATGCCATTGCCGGCAAATGTGACATCGAGATAGCACGGGAATCGTTTCTCGTTGCAAGC AGTCATGCCCATATCCTGAACGTCCACTAA
Upstream 100 bases:
>100_bases ATCACATTTTAGGTGATCGGGAACCATTTCGTGAGGCAAGCATTTCGCGCATGGGAGCAAACACCGCCATGAAGGCGCGT GAAACAGGGAGGAAAATGAC
Downstream 100 bases:
>100_bases AAGTCACTGACCGTCATGATGATTGAGCCCTTCTTCATGAAGGGCTTTTCTTTGCGCGAGGCTCCCGCAGCGCTTTCATG CACGGCGCAGCCTCCCGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MLINRTEPCHHASWMKPVAIHLPLCVAVEIYSPLVALDMLMYRWPEEHGPEYEEARRNCLNAIAGKCDIEIARESFLVAS SHAHILNVH
Sequences:
>Translated_89_residues MLINRTEPCHHASWMKPVAIHLPLCVAVEIYSPLVALDMLMYRWPEEHGPEYEEARRNCLNAIAGKCDIEIARESFLVAS SHAHILNVH >Mature_89_residues MLINRTEPCHHASWMKPVAIHLPLCVAVEIYSPLVALDMLMYRWPEEHGPEYEEARRNCLNAIAGKCDIEIARESFLVAS SHAHILNVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10160; Mature: 10160
Theoretical pI: Translated: 6.38; Mature: 6.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 9.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINRTEPCHHASWMKPVAIHLPLCVAVEIYSPLVALDMLMYRWPEEHGPEYEEARRNCL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH NAIAGKCDIEIARESFLVASSHAHILNVH HHHCCCCCEEEHHHHHEEECCCCEEEECC >Mature Secondary Structure MLINRTEPCHHASWMKPVAIHLPLCVAVEIYSPLVALDMLMYRWPEEHGPEYEEARRNCL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH NAIAGKCDIEIARESFLVASSHAHILNVH HHHCCCCCEEEHHHHHEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA