Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is yhbS [H]
Identifier: 15889089
GI number: 15889089
Start: 1770246
End: 1770749
Strand: Reverse
Name: yhbS [H]
Synonym: Atu1785
Alternate gene names: 15889089
Gene position: 1770749-1770246 (Counterclockwise)
Preceding gene: 15889090
Following gene: 15889088
Centisome position: 62.32
GC content: 62.3
Gene sequence:
>504_bases ATGATCATCCGGCCGGAGCGGCAGGGTGATGAAGAGGCGATCGCTCGCGTTACGGAAGATGCCTTCCGTAACGTCGAACA CCGTAGCGGGACAGAACAACTGATCGTCGCGCGGCTGCGGGACGCCGGCGCTCTGACGGTTTCACTGGTTGCGGAAGACA GCGAAGGCATCATCGGCCATGTCGGTTTCTCGCCGGTGACGCTGTCGAGTGGCGAGACCGGCTGGTTCTGCCTCGCGCCG CTCTCCGTTACACCTGAAAGGCAGGGCGAAGGTGTCGGTTCGAGGCTGGCGCGTGACGGGCTTGCCGTGCTGGAGCGGCT GAGCGCTGCCGGCTGCGTTGTTGTCGGCGATCCCGCCTATTACGGCCGCTTCGGTTTTCGCCCTGTCGCGGGCCTGAGTG CCGAGGGGATTCCTGACGAATATTTCACAGTTCTTCGCTTGCATGGCGGAACTCCATCCGGCATTGTCGGTTTTCATCCG GGTTTCGATGGCGACAACGCTTAA
Upstream 100 bases:
>100_bases TCTTCTCGCTGCCGATCCAGCTGCTCGCCTATCACACCGCCGTCTTCATGGGCACGGATGTGGACCAGCCGCGCAATCTG GCGAAATCGGTGACCGTGGA
Downstream 100 bases:
>100_bases TTCCGAACGGTAAATGACCGATATTCCAGTCAAAATTTCATTCGCAGCCCGTCTGCGCAACAGCTTCCTGACGGGTGTTC TGATCCTCGCACCTGTCACC
Product: acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MIIRPERQGDEEAIARVTEDAFRNVEHRSGTEQLIVARLRDAGALTVSLVAEDSEGIIGHVGFSPVTLSSGETGWFCLAP LSVTPERQGEGVGSRLARDGLAVLERLSAAGCVVVGDPAYYGRFGFRPVAGLSAEGIPDEYFTVLRLHGGTPSGIVGFHP GFDGDNA
Sequences:
>Translated_167_residues MIIRPERQGDEEAIARVTEDAFRNVEHRSGTEQLIVARLRDAGALTVSLVAEDSEGIIGHVGFSPVTLSSGETGWFCLAP LSVTPERQGEGVGSRLARDGLAVLERLSAAGCVVVGDPAYYGRFGFRPVAGLSAEGIPDEYFTVLRLHGGTPSGIVGFHP GFDGDNA >Mature_167_residues MIIRPERQGDEEAIARVTEDAFRNVEHRSGTEQLIVARLRDAGALTVSLVAEDSEGIIGHVGFSPVTLSSGETGWFCLAP LSVTPERQGEGVGSRLARDGLAVLERLSAAGCVVVGDPAYYGRFGFRPVAGLSAEGIPDEYFTVLRLHGGTPSGIVGFHP GFDGDNA
Specific function: Unknown
COG id: COG3153
COG function: function code R; Predicted acetyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789546, Length=131, Percent_Identity=39.6946564885496, Blast_Score=83, Evalue=7e-18, Organism=Escherichia coli, GI1790761, Length=127, Percent_Identity=37.7952755905512, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 17623; Mature: 17623
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIRPERQGDEEAIARVTEDAFRNVEHRSGTEQLIVARLRDAGALTVSLVAEDSEGIIGH CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEE VGFSPVTLSSGETGWFCLAPLSVTPERQGEGVGSRLARDGLAVLERLSAAGCVVVGDPAY CCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCC YGRFGFRPVAGLSAEGIPDEYFTVLRLHGGTPSGIVGFHPGFDGDNA CCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEECCCCCCCCC >Mature Secondary Structure MIIRPERQGDEEAIARVTEDAFRNVEHRSGTEQLIVARLRDAGALTVSLVAEDSEGIIGH CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCEEEE VGFSPVTLSSGETGWFCLAPLSVTPERQGEGVGSRLARDGLAVLERLSAAGCVVVGDPAY CCCCEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCC YGRFGFRPVAGLSAEGIPDEYFTVLRLHGGTPSGIVGFHPGFDGDNA CCCCCCCCCCCCCCCCCCHHHEEEEEECCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]