Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is surE
Identifier: 15889009
GI number: 15889009
Start: 1687372
End: 1688142
Strand: Reverse
Name: surE
Synonym: Atu1702
Alternate gene names: 15889009
Gene position: 1688142-1687372 (Counterclockwise)
Preceding gene: 159184878
Following gene: 159184877
Centisome position: 59.41
GC content: 60.57
Gene sequence:
>771_bases ATGCGGATTTTGCTGACCAATGACGACGGTGTCCATGCCGAGGGGCTGGCGGTGCTGGAGCGTATTGCTCGCACGCTGTC CGACGACGTCTGGATCGTTGCGCCGGAAACCGACCAGAGCGGTCTCGCACACTCGCTCACGCTTTCCGAGCCGCTCAGGC TGCGTAAGGTTTCCGACAAACATTTCGCGCTGCGTGGCACGCCGACCGATTGCGTCATCATGGGTATTCGCGAAGTCCTG CCGGAAAAGCCCGATCTCGTGCTCTCAGGCGTCAATGCCGGTGCCAACATGGCCGATGACGTGACCTATTCCGGCACGAT TGCCGGCGCCATCGAAGGCACGCTGCAGGGCGTGCGCTCCTTCGCGCTCAGCCAGGCCTTCAGCCACGGCGAAGGCCGCG TCGTGCCGTGGGAGGTTGCCGAGACCTATGCGCCGGATCTTCTGCGCAAGCTGATGAATGTCGATCTGCCTGACGGCACC TTCCTCAACCTCAATTTCCCCAATTGTGCGCCAAAGGATATGCAGGGCGTTTCCGTCACCGGGCAGGGCAAGCTCGATTT CGGCCTGACGGTGGAAGAACGCCAGGATGGTCGTGGTCTTCCTTATTACTGGTTACGCTTCGGCGAACGCCTTGGCACCT TCCGCGAGGGCACGGATATCCACGCCTTGAAACACGGCAAGATTTCGGTCACACCGCTTAAGCTTGACCTGACGGACTAC ACGGTCAAGGATCGGGTTGCGCAAGCACTTGGATTCGGAGTCGCCGATTGA
Upstream 100 bases:
>100_bases CTCGGGACAGGCCCGAGGATGACGTTGAGAGAACTGCACACTTCACCGCCGGAGGAGAGGATGCTCCGTCCCTGAAGACA TAAAGAGCGGAGAGAGAAAC
Downstream 100 bases:
>100_bases AATCTGCCATGGTCGAAAAGGAAGGTTTTGCCGCTCTCGTTCTCCGTCTGCGGGGCGAGGGGATTTCCGATCTCGACCTG TTGACGGCGGTTGAGCAGAC
Product: stationary phase survival protein SurE
Products: NA
Alternate protein names: Nucleoside 5'-monophosphate phosphohydrolase
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRILLTNDDGVHAEGLAVLERIARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDKHFALRGTPTDCVIMGIREVL PEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRSFALSQAFSHGEGRVVPWEVAETYAPDLLRKLMNVDLPDGT FLNLNFPNCAPKDMQGVSVTGQGKLDFGLTVEERQDGRGLPYYWLRFGERLGTFREGTDIHALKHGKISVTPLKLDLTDY TVKDRVAQALGFGVAD
Sequences:
>Translated_256_residues MRILLTNDDGVHAEGLAVLERIARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDKHFALRGTPTDCVIMGIREVL PEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRSFALSQAFSHGEGRVVPWEVAETYAPDLLRKLMNVDLPDGT FLNLNFPNCAPKDMQGVSVTGQGKLDFGLTVEERQDGRGLPYYWLRFGERLGTFREGTDIHALKHGKISVTPLKLDLTDY TVKDRVAQALGFGVAD >Mature_256_residues MRILLTNDDGVHAEGLAVLERIARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDKHFALRGTPTDCVIMGIREVL PEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRSFALSQAFSHGEGRVVPWEVAETYAPDLLRKLMNVDLPDGT FLNLNFPNCAPKDMQGVSVTGQGKLDFGLTVEERQDGRGLPYYWLRFGERLGTFREGTDIHALKHGKISVTPLKLDLTDY TVKDRVAQALGFGVAD
Specific function: Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
COG id: COG0496
COG function: function code R; Predicted acid phosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surE nucleotidase family
Homologues:
Organism=Escherichia coli, GI1789101, Length=252, Percent_Identity=38.4920634920635, Blast_Score=160, Evalue=8e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): SURE_AGRT5 (Q8UEQ3)
Other databases:
- EMBL: AE007869 - PIR: AH2785 - PIR: B97565 - RefSeq: NP_354690.1 - ProteinModelPortal: Q8UEQ3 - SMR: Q8UEQ3 - STRING: Q8UEQ3 - GeneID: 1133740 - GenomeReviews: AE007869_GR - KEGG: atu:Atu1702 - eggNOG: COG0496 - HOGENOM: HBG600532 - OMA: NGFYYVN - PhylomeDB: Q8UEQ3 - ProtClustDB: PRK00346 - BioCyc: ATUM176299-1:ATU1702-MONOMER - GO: GO:0005737 - HAMAP: MF_00060 - InterPro: IPR002828 - Gene3D: G3DSA:3.40.1210.10 - TIGRFAMs: TIGR00087
Pfam domain/function: PF01975 SurE; SSF64167 SurE-like_Pase/nucleotidase
EC number: =3.1.3.5
Molecular weight: Translated: 27859; Mature: 27859
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLTNDDGVHAEGLAVLERIARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDK CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCHHEEECCCC HFALRGTPTDCVIMGIREVLPEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRS EEEEECCCCHHHEEEHHHHCCCCCCEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHHH FALSQAFSHGEGRVVPWEVAETYAPDLLRKLMNVDLPDGTFLNLNFPNCAPKDMQGVSVT HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEE GQGKLDFGLTVEERQDGRGLPYYWLRFGERLGTFREGTDIHALKHGKISVTPLKLDLTDY CCCCEEECEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEEEECCCC TVKDRVAQALGFGVAD HHHHHHHHHHCCCCCC >Mature Secondary Structure MRILLTNDDGVHAEGLAVLERIARTLSDDVWIVAPETDQSGLAHSLTLSEPLRLRKVSDK CEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCHHEEECCCC HFALRGTPTDCVIMGIREVLPEKPDLVLSGVNAGANMADDVTYSGTIAGAIEGTLQGVRS EEEEECCCCHHHEEEHHHHCCCCCCEEEECCCCCCCCCCCCEECCEEHHHHHHHHHHHHH FALSQAFSHGEGRVVPWEVAETYAPDLLRKLMNVDLPDGTFLNLNFPNCAPKDMQGVSVT HHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCEEEE GQGKLDFGLTVEERQDGRGLPYYWLRFGERLGTFREGTDIHALKHGKISVTPLKLDLTDY CCCCEEECEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCEEEEEEEEEECCCC TVKDRVAQALGFGVAD HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194