Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888970
Identifier: 15888970
GI number: 15888970
Start: 1649579
End: 1650568
Strand: Direct
Name: 15888970
Synonym: Atu1663
Alternate gene names: NA
Gene position: 1649579-1650568 (Clockwise)
Preceding gene: 159184862
Following gene: 159184865
Centisome position: 58.05
GC content: 53.84
Gene sequence:
>990_bases ATGACTGAAAATAGCAATCTGAAACGTCGTGTAAGAGCTCGCGCAGCCAAAACCGGCGAATCTTATACTGCTGCTCTCCA GCATATTCGCAGAATACCGGACGCTCCTTCGAGCAACTCAATACGAGTGGCGGTCGCGCAAACATCCTTGTTCAACGATC CCCGCGACGTTTCCGCCCTGAAGACCTGCGGAAACGAGATACGCCGTCTCATGGGTAATGCCCATAATGCTGGCACACGT CTCATACACTTCCCTGAAGGGGCAACGTGCTGGCCGCATAAACGGATCATGTCAGAGACTGGCCCGCGGGAAATCGGCCC TGCCGACTGGACACGCTTTGAATGGAAAACTCTGCGCGAAGAACTGGAGGCGATCAGGAAATTGGCGCGAAAACTGAAAC TCTGGACAGTTCTAGGTGCCATTCATCAACTGACGCCGCCACACCGTCCATATAACAGCCTCTATGTCATCTCAGATCGT GGAACGCTCATAACCCGCTATGATGAGCGCCTTTTGTCGAAAACCAAAATCTCGTTCATGTACTCGCCGGGACGCCTCCC GGTGACGTTCGAAGTCGATTGCTTCCGTTTCGGTTGCGCGCTTGGCATGGAGGCGCATTATCCGGAAATATTCATGGAAT ATGAGAAGCTGAATGTTGATTGCGTGCTGTTTTCTACCGCAGGCGAAGACGCTTCAAATGCCCATGCGTTTGCCGCCGAG ATATTGGGTCATGCAGCGAGCAACACCTATTGGGTCAGCTATTCCACACTTGCCGCCCAAAGTCCCGGCGCCCCATCGGG AATAGCAGCACCGGATGGTCAATGGGTTGCTCAATGCCCAATGAATGGGTTACCGGCAATTGCGCTGGCGGACGTCATCA TCGATCGGGAACATCCCGCGCGACCATGGCGGCAAAAAGCTCGTACCGATCTATATGCCCCTCATCAGGTGGATAACGAT CCGAGAAGCGATAGCCGGAAGGAGTTCTAG
Upstream 100 bases:
>100_bases TCAACGGAGGCAAAGGGACTGTTGTCTCAGGTAACTGTCTTGGTCCGATCGTTTCGGGTGGGTTGCTGGGGAACTGCGTC CGAAACGTGAAAGGCCGACA
Downstream 100 bases:
>100_bases CGTAGCGCCCAGTGGCGATGATTATGCCGCTGGCCAACCGGTTCAAGGCCGAACACATCGCATCCTGAATCAAACGAAAA GGCCGCAGCTTTCGCCACGG
Product: amidohydrolase
Products: NA
Alternate protein names: Hydrolase Protein; Carbon-Nitrogen Family Hydrolase; Carbon-Nitrogen Hydrolase; Hydrolase
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MTENSNLKRRVRARAAKTGESYTAALQHIRRIPDAPSSNSIRVAVAQTSLFNDPRDVSALKTCGNEIRRLMGNAHNAGTR LIHFPEGATCWPHKRIMSETGPREIGPADWTRFEWKTLREELEAIRKLARKLKLWTVLGAIHQLTPPHRPYNSLYVISDR GTLITRYDERLLSKTKISFMYSPGRLPVTFEVDCFRFGCALGMEAHYPEIFMEYEKLNVDCVLFSTAGEDASNAHAFAAE ILGHAASNTYWVSYSTLAAQSPGAPSGIAAPDGQWVAQCPMNGLPAIALADVIIDREHPARPWRQKARTDLYAPHQVDND PRSDSRKEF
Sequences:
>Translated_329_residues MTENSNLKRRVRARAAKTGESYTAALQHIRRIPDAPSSNSIRVAVAQTSLFNDPRDVSALKTCGNEIRRLMGNAHNAGTR LIHFPEGATCWPHKRIMSETGPREIGPADWTRFEWKTLREELEAIRKLARKLKLWTVLGAIHQLTPPHRPYNSLYVISDR GTLITRYDERLLSKTKISFMYSPGRLPVTFEVDCFRFGCALGMEAHYPEIFMEYEKLNVDCVLFSTAGEDASNAHAFAAE ILGHAASNTYWVSYSTLAAQSPGAPSGIAAPDGQWVAQCPMNGLPAIALADVIIDREHPARPWRQKARTDLYAPHQVDND PRSDSRKEF >Mature_328_residues TENSNLKRRVRARAAKTGESYTAALQHIRRIPDAPSSNSIRVAVAQTSLFNDPRDVSALKTCGNEIRRLMGNAHNAGTRL IHFPEGATCWPHKRIMSETGPREIGPADWTRFEWKTLREELEAIRKLARKLKLWTVLGAIHQLTPPHRPYNSLYVISDRG TLITRYDERLLSKTKISFMYSPGRLPVTFEVDCFRFGCALGMEAHYPEIFMEYEKLNVDCVLFSTAGEDASNAHAFAAEI LGHAASNTYWVSYSTLAAQSPGAPSGIAAPDGQWVAQCPMNGLPAIALADVIIDREHPARPWRQKARTDLYAPHQVDNDP RSDSRKEF
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36915; Mature: 36784
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENSNLKRRVRARAAKTGESYTAALQHIRRIPDAPSSNSIRVAVAQTSLFNDPRDVSAL CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCHHHHHH KTCGNEIRRLMGNAHNAGTRLIHFPEGATCWPHKRIMSETGPREIGPADWTRFEWKTLRE HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH ELEAIRKLARKLKLWTVLGAIHQLTPPHRPYNSLYVISDRGTLITRYDERLLSKTKISFM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHEEEE YSPGRLPVTFEVDCFRFGCALGMEAHYPEIFMEYEKLNVDCVLFSTAGEDASNAHAFAAE ECCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH ILGHAASNTYWVSYSTLAAQSPGAPSGIAAPDGQWVAQCPMNGLPAIALADVIIDREHPA HHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCC RPWRQKARTDLYAPHQVDNDPRSDSRKEF CHHHHHHHCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TENSNLKRRVRARAAKTGESYTAALQHIRRIPDAPSSNSIRVAVAQTSLFNDPRDVSAL CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCHHHHHH KTCGNEIRRLMGNAHNAGTRLIHFPEGATCWPHKRIMSETGPREIGPADWTRFEWKTLRE HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHH ELEAIRKLARKLKLWTVLGAIHQLTPPHRPYNSLYVISDRGTLITRYDERLLSKTKISFM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHEEEE YSPGRLPVTFEVDCFRFGCALGMEAHYPEIFMEYEKLNVDCVLFSTAGEDASNAHAFAAE ECCCCCEEEEEEHHHHHHHHCCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHH ILGHAASNTYWVSYSTLAAQSPGAPSGIAAPDGQWVAQCPMNGLPAIALADVIIDREHPA HHHHCCCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCC RPWRQKARTDLYAPHQVDNDPRSDSRKEF CHHHHHHHCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA