Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888873
Identifier: 15888873
GI number: 15888873
Start: 1542139
End: 1542306
Strand: Direct
Name: 15888873
Synonym: Atu8158
Alternate gene names: NA
Gene position: 1542139-1542306 (Clockwise)
Preceding gene: 15888871
Following gene: 159184810
Centisome position: 54.27
GC content: 52.98
Gene sequence:
>168_bases ATGGTTACATCTACGCTCGTCAGCATTCTGATCACCTTCCTGGTGATCGTGCTCGTCTTGTGGCTCATCGCGCGACTGCC GGTCGGCGGCGGCGCAAAACAGATCGCCCAGGTGATCGTCATCATCATCGGCATTATTTCGCTATTGAAATATCTCGCCG TATTCTGA
Upstream 100 bases:
>100_bases GCGCGCAACCAACCGTATGGAACAAAAAACCGTCTGGCGCTTTTTATTCACACGACGGTGAACGACCGTTGAACCTTTAT TTTACAGGGAGCTGGGACAT
Downstream 100 bases:
>100_bases TGTCCCGGCGGAGCGAAACGAGAAAGGCGGCGAAAGCCGCCTTTTTTGCGCATTCGTCACCGGCCTGATCTCTACTGGCG GGGCTCGAACTGAAAGGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 55
Protein sequence:
>55_residues MVTSTLVSILITFLVIVLVLWLIARLPVGGGAKQIAQVIVIIIGIISLLKYLAVF
Sequences:
>Translated_55_residues MVTSTLVSILITFLVIVLVLWLIARLPVGGGAKQIAQVIVIIIGIISLLKYLAVF >Mature_55_residues MVTSTLVSILITFLVIVLVLWLIARLPVGGGAKQIAQVIVIIIGIISLLKYLAVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5905; Mature: 5905
Theoretical pI: Translated: 10.90; Mature: 10.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSTLVSILITFLVIVLVLWLIARLPVGGGAKQIAQVIVIIIGIISLLKYLAVF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVTSTLVSILITFLVIVLVLWLIARLPVGGGAKQIAQVIVIIIGIISLLKYLAVF CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA