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The map label for this gene is ychE [C]

Identifier: 15888833

GI number: 15888833

Start: 1498971

End: 1499600

Strand: Direct

Name: ychE [C]

Synonym: Atu1508

Alternate gene names: 15888833

Gene position: 1498971-1499600 (Clockwise)

Preceding gene: 15888831

Following gene: 15888834

Centisome position: 52.75

GC content: 60.48

Gene sequence:

>630_bases
ATGGCCAGCAGCGAAACCCTCATCAACGCGCTTACCACACTTCTGGTCACGCTCGATCCGCCCGGTCTCGCCCCCGTTTT
CCTGGCGCTCACCGTCGGCATGACGCGCGATCAGCGCAGCCAGGTAGCGTTGCGCGGCTCCATCATCGCCTTTGGCATTC
TCGCCGTCTTCGCGCTCTTCGGTCTCGCCATTCTCAACCTGCTCGGCATTTCGCTCGGTGCCTTCCGCATCGCCGGTGGC
CTTCTGCTGTTCTGGATTTCCTTCGAGATGATTTTCGAGAAACGCCAGGAGCGCAAGGAAAAGACCTCGGAAATCGCCAT
CACCAAGGATCATCTGCATAATCTGGCGGTCTTTCCGCTGGCCCTGCCGCTAATCGCCGGGCCGGGCGCCATTTCCGCCA
CCGTGCTGCTTGCCGGCTCAATGAAAACCACCGTCGAGATGGTGGTGCTCATCCTGATCCTCGCTTTCGCCATGGCCCTC
GTTTATGCCGCGCTGATCGTCTCGGAACGCATGGACCGTTTTCTCGGCAATACCGGCCGCGCCATCCTCACCCGGCTGCT
CGGCGTGCTGTTGGCAGCACTCTCGGTACAATTCGTGGTCGACGGCATAAAGTCGGCCTTCGATTTCTGA

Upstream 100 bases:

>100_bases
GCTTTTCACGATTTAGCCCGGCAAAAGCACCGCCGCTCCCTTTCAATGTTCCGGCGAGTTGCGTAGGCTTCGCCGTAAAA
ACAGATAAGACGGGGAAAGA

Downstream 100 bases:

>100_bases
TCTCCGCTATGATCGCATGTCTGCGCAACAAAATCCCGCATGCGGCGATAACCCAGGAAAATCCGTCCTTTAAATCCGGC
TGCCATTTCGGCTAAAAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MASSETLINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALFGLAILNLLGISLGAFRIAGG
LLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPLALPLIAGPGAISATVLLAGSMKTTVEMVVLILILAFAMAL
VYAALIVSERMDRFLGNTGRAILTRLLGVLLAALSVQFVVDGIKSAFDF

Sequences:

>Translated_209_residues
MASSETLINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALFGLAILNLLGISLGAFRIAGG
LLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPLALPLIAGPGAISATVLLAGSMKTTVEMVVLILILAFAMAL
VYAALIVSERMDRFLGNTGRAILTRLLGVLLAALSVQFVVDGIKSAFDF
>Mature_208_residues
ASSETLINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALFGLAILNLLGISLGAFRIAGGL
LLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPLALPLIAGPGAISATVLLAGSMKTTVEMVVLILILAFAMALV
YAALIVSERMDRFLGNTGRAILTRLLGVLLAALSVQFVVDGIKSAFDF

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=198, Percent_Identity=34.8484848484849, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787809, Length=188, Percent_Identity=32.4468085106383, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789842, Length=200, Percent_Identity=29, Blast_Score=75, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22341; Mature: 22210

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASSETLINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALF
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAILNLLGISLGAFRIAGGLLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPLIAGPGAISATVLLAGSMKTTVEMVVLILILAFAMALVYAALIVSERMDRFLGNTGR
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AILTRLLGVLLAALSVQFVVDGIKSAFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASSETLINALTTLLVTLDPPGLAPVFLALTVGMTRDQRSQVALRGSIIAFGILAVFALF
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
GLAILNLLGISLGAFRIAGGLLLFWISFEMIFEKRQERKEKTSEIAITKDHLHNLAVFPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALPLIAGPGAISATVLLAGSMKTTVEMVVLILILAFAMALVYAALIVSERMDRFLGNTGR
HHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
AILTRLLGVLLAALSVQFVVDGIKSAFDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]