Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888831
Identifier: 15888831
GI number: 15888831
Start: 1495604
End: 1495864
Strand: Direct
Name: 15888831
Synonym: Atu1506
Alternate gene names: NA
Gene position: 1495604-1495864 (Clockwise)
Preceding gene: 159184788
Following gene: 15888833
Centisome position: 52.63
GC content: 61.69
Gene sequence:
>261_bases ATGGCAGTCAACGAGAATTATTCGGACATTGCGTCTGGCAACGGGCATGGCAGCCAGTCGGTTCTGCATCCCATTCACGA GGCGGCAATGCGTATCGCCGATCTCGGCCTCAACCGTTCCAAGGCAAAGACGCGTGATCTCGTCAGCCTGCTTCTGTCGC ACGGTGCCCGCGCCTGGCGCGCCAACCAGCCGGAAGCCCGAATCCACCTTCATGTCGCCCACCGCTCGGGCCGCGCACCA ATCCATATCCGCATCCGGTAA
Upstream 100 bases:
>100_bases GGGCGTCACTCCAGTAACTGATGTTTCCGCAGGCGGTGCTTCATTGTCGAAACATCGCCTGTCTCCTCGAATTGTGTAAT GAGTAGCGAGGCTTTCGAAG
Downstream 100 bases:
>100_bases CGAACCGGACGCAGCAAGCAAGACCCAAAGAAAAACCCCGCGGCGCTCAAGCACCGCGGGGTTTTCTGTTGATTGGCGAA GCAGAAACGAGGCGGCTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAVNENYSDIASGNGHGSQSVLHPIHEAAMRIADLGLNRSKAKTRDLVSLLLSHGARAWRANQPEARIHLHVAHRSGRAP IHIRIR
Sequences:
>Translated_86_residues MAVNENYSDIASGNGHGSQSVLHPIHEAAMRIADLGLNRSKAKTRDLVSLLLSHGARAWRANQPEARIHLHVAHRSGRAP IHIRIR >Mature_85_residues AVNENYSDIASGNGHGSQSVLHPIHEAAMRIADLGLNRSKAKTRDLVSLLLSHGARAWRANQPEARIHLHVAHRSGRAPI HIRIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9483; Mature: 9352
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVNENYSDIASGNGHGSQSVLHPIHEAAMRIADLGLNRSKAKTRDLVSLLLSHGARAWR CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC ANQPEARIHLHVAHRSGRAPIHIRIR CCCCCCEEEEEEECCCCCCCEEEEEC >Mature Secondary Structure AVNENYSDIASGNGHGSQSVLHPIHEAAMRIADLGLNRSKAKTRDLVSLLLSHGARAWR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCC ANQPEARIHLHVAHRSGRAPIHIRIR CCCCCCEEEEEEECCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA