Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888793
Identifier: 15888793
GI number: 15888793
Start: 1464719
End: 1465039
Strand: Reverse
Name: 15888793
Synonym: Atu1469
Alternate gene names: NA
Gene position: 1465039-1464719 (Counterclockwise)
Preceding gene: 15888800
Following gene: 229007177
Centisome position: 51.56
GC content: 53.58
Gene sequence:
>321_bases ATGACACAGGTTCTTTCTGTTTCTGCAAATACGGCAGCCTATGCGCTGGAAGCGGTAAAGCCATCGCAGCGCGTTCCGCG CAAAACGGAAATCGAAGACGCTATTCACGAGTTGGCGCGTAAGGCCGAACGCGGTGAAGATTTCCAGCTTCGCGGCATGA TGACCGTGATCAAGCCACCGGCCCTGGCGCTTTATTTCCTCACCGCTGCCAGTCAGCGCCAGGAACCGCAGGCGACGCTG GAGCAGGCCGTCGAGGCATATGAGGAAAACAACTTCCCACAGAAGTCCAAAAATGATATTCTATATCAAAGCGATATATA G
Upstream 100 bases:
>100_bases ATTAAAATACGATTAAATTGCAGCGTCGCGATTTAGCCTTCCAACAAGATGCGGGTGCTAATATTCGGTTTTCAGGGTCG CAAAGATGGCCGGGGGTTGA
Downstream 100 bases:
>100_bases ATATCTTAATTCTGTTTCTTATTTTCCATGCTTGCAAAGCCGACACCCGCGTTCAGTCTGGTGTCAGCTTTATTTTCTAG ATATTTTTCGACCGAGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTQVLSVSANTAAYALEAVKPSQRVPRKTEIEDAIHELARKAERGEDFQLRGMMTVIKPPALALYFLTAASQRQEPQATL EQAVEAYEENNFPQKSKNDILYQSDI
Sequences:
>Translated_106_residues MTQVLSVSANTAAYALEAVKPSQRVPRKTEIEDAIHELARKAERGEDFQLRGMMTVIKPPALALYFLTAASQRQEPQATL EQAVEAYEENNFPQKSKNDILYQSDI >Mature_105_residues TQVLSVSANTAAYALEAVKPSQRVPRKTEIEDAIHELARKAERGEDFQLRGMMTVIKPPALALYFLTAASQRQEPQATLE QAVEAYEENNFPQKSKNDILYQSDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11911; Mature: 11779
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQVLSVSANTAAYALEAVKPSQRVPRKTEIEDAIHELARKAERGEDFQLRGMMTVIKPP CCCEEECCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCH ALALYFLTAASQRQEPQATLEQAVEAYEENNFPQKSKNDILYQSDI HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC >Mature Secondary Structure TQVLSVSANTAAYALEAVKPSQRVPRKTEIEDAIHELARKAERGEDFQLRGMMTVIKPP CCEEECCCCHHHHHHHHCCCHHCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHCCH ALALYFLTAASQRQEPQATLEQAVEAYEENNFPQKSKNDILYQSDI HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA