Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888758
Identifier: 15888758
GI number: 15888758
Start: 1427802
End: 1428446
Strand: Direct
Name: 15888758
Synonym: Atu1433
Alternate gene names: NA
Gene position: 1427802-1428446 (Clockwise)
Preceding gene: 159184758
Following gene: 15888759
Centisome position: 50.25
GC content: 60.78
Gene sequence:
>645_bases ATGGTGAAGTCGGTCCTCTGCTTTGGCGATTCTCTCACATGGGGATCAAATGCGGAAACGGGTGGCCGGCACAGCCATGA CGATCTTTGGCCGAGCGTCTTGCAGAAGGCGCTCGGTTCCGACGTGCATGTGATCCACGAGGGTCTGGGCGGTCGCACCA CCGCTTATGACGACCACACCGGCGATTGCGACCGCAATGGCGCAAGGCTTTTGCCGACGCTGCTGCATAGCCACGCGCCG CTGGATATGGTTATCATCATGCTCGGCACCAACGACATGAAGCCGGCGATCCATGGTTCGGCCATTGTCGCCATGAAGGG TGTCGAGCGGCTGGTGAAACTCACGCGCAACCACGTCTGGCAGGTGTCGGACTGGGAAGCACCTGACGTTCTGATCGTCG CGCCGCCGCAACTATGCGAAACGGCCAATCCGTTCATGGGCGCGATCTTTCGTGATGCTATCGACGAATCGGCGATGCTG GCTTCCGTCTACAGGGACCTTGCCGATGAACTCGATTGCGGCTTTTTCGATGCCGGGTCGGTTGCCCGCACGACGCCGGT GGACGGCGTTCATCTCGATGCTGAAAACACACGGGCCATCGGCCGCGGGCTGGAGCCCGTCGTCCGCATGATGCTCGGAC TTTGA
Upstream 100 bases:
>100_bases CCATCGCTGCGTCGATGGCGCGCTCGGAGCCGAACTGATCGGCGCGTTCAAGCGCTACATCGAAAACCCGATGGGCATGC TGGTTTGATCGGAGAATAAT
Downstream 100 bases:
>100_bases CACTCATTCTCGTTTCGGGACGGTTTACCATCATCCGAACAAGACAAGGCAGGATTTCCAATGGCTCAATCTTATGACGT CATCATCATCGGTTCGGGAC
Product: arylesterase
Products: NA
Alternate protein names: Arylesterase Protein; GDSL Family Lipase; Lipolytic G-D-S-L; GDSL-Family Lipase/Acylhydrolase; Hydrolase; Lipolytic Protein; Methylated-DNA-Protein-Cysteinemethyltransferase; Lipolytic G-D-S-L Family; GDSL-Like Lipase/Acylhydrolase; Lipolytic Protein G-D-S-L Family; Lysophospholipase-Like Protein
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL
Sequences:
>Translated_214_residues MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL >Mature_214_residues MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHTGDCDRNGARLLPTLLHSHAP LDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVWQVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAML ASVYRDLADELDCGFFDAGSVARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL
Specific function: Unknown
COG id: COG2755
COG function: function code E; Lysophospholipase L1 and related esterases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23135; Mature: 23135
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHT CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCC GDCDRNGARLLPTLLHSHAPLDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVW CCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE QVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAMLASVYRDLADELDCGFFDAGS ECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL CCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHCC >Mature Secondary Structure MVKSVLCFGDSLTWGSNAETGGRHSHDDLWPSVLQKALGSDVHVIHEGLGGRTTAYDDHT CCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCCCCCCCCCCCC GDCDRNGARLLPTLLHSHAPLDMVIIMLGTNDMKPAIHGSAIVAMKGVERLVKLTRNHVW CCCCCCCHHHHHHHHHCCCCHHHEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCE QVSDWEAPDVLIVAPPQLCETANPFMGAIFRDAIDESAMLASVYRDLADELDCGFFDAGS ECCCCCCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VARTTPVDGVHLDAENTRAIGRGLEPVVRMMLGL CCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA