Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888696

Identifier: 15888696

GI number: 15888696

Start: 1364449

End: 1365648

Strand: Reverse

Name: 15888696

Synonym: Atu1370

Alternate gene names: NA

Gene position: 1365648-1364449 (Counterclockwise)

Preceding gene: 159184734

Following gene: 15888695

Centisome position: 48.06

GC content: 57.25

Gene sequence:

>1200_bases
ATGACAGAAGATTATTCAATACGCGTTGCGCAATCCTTCACGGATATCGATCCGGAAAGCTGGAACCAGCTTTCCGGAGT
TTCGCGCAATACGTCAGAAAAATACTACAACCCCTTTATTTCTCATGCGTTTTTATCCTCCATGGAGGATTCCGGCTCGG
CGACGGCAAAGACCGGCTGGCTTGGCCATCACTTGCTGCTGGAAGATGCCGTGGGAATGCTCGTCGGCGCTGTGCCGGCC
TATCTGAAGAACCACAGTCAGGGCGAATATGTCTTCGACCACGGCTGGGCGGACGCTTTTGAACGGGCCGGTGGTCACTA
TTATCCAAAACTGCAATGTTCGGTTCCCTTCACGCCTGCGACCGGGCCGAGGCTGCTTGTTTCCGAAGCCGTGGATGCCA
CGCGCTTCAAGCCGCTTCTGGCCTCTGGTCTCGCGCAGGTAACGGAAAAGATCGGCGTTTCCTCCGCGCATGTCACGTTT
CTGGAAGAGGATGATCTGTCTGCCCTGCTGCCGCGCGATTTCCTGCACAGGAAAGACCAGCAGTTCCACTTCATCAATCA
CGGTTATCGCGACCACGATGATTTTCTCGACGCCCTCTCCTCGCGCAAACGCAAGGGGCTGAAAAAGGAACGCCGCGCCG
CGCTGGAACATGGCATCGAGATCGACTGGCTGACCGGAAGCGATCTGACCGAAGATATCTGGGACCAGTTCTTCGCCTTC
TACATGGATACCGGCAGCCGCAAATGGGGCCGGCCCTATCTGACGCGGAAGTTCTACTCGCTGATCGGCGAGCGCATGGC
CGATGATGTGCTGCTGGTGATGGCCAAACGCGAGGGGCGCTACATTGCCGGGGCGATCAATTTCATCGGTTCGGATGCAC
TTTATGGCCGCCACTGGGGCTGCATCGAGGATCATCCCTTCCTGCATTTCGAGGTCTGTTATCATCAGGCGATCGATTTC
GCGCTGGCGAAGAGATTGAAACGGGTGGAAGCCGGTGCGCAGGGCGAACACAAGCTGGCGCGTGGTTATGTGCCGGTCAC
TACCCATTCGGCGCATTTCATCGCCCATCCGGGCCTGCGCCGCGCCATTGCCGATTATCTTCAGCGCGAGCGCGAAGAAG
TCGAGCATATCGGCGATTATCTTGATGAACACACGCCCTTCCGCAAGGGCGAGAGACAGGAACACGAACCGGACGCATAG

Upstream 100 bases:

>100_bases
GGACGGTAAGGGATGAAAATGCGCGCGCGACTACCTATAAATATGCGGACCAGATGACATTCGAAGGTTTCGACCCGAGA
GAGAACCCGTCCGCCACGGC

Downstream 100 bases:

>100_bases
TCCGCGACGAGGAGATCACCGATGGCCAGCGCCTATGACGACAACAATATCTTCGCAAAAATCCTGCGCGGCGAAATTCC
GAGCCACAAGCTTTATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 399; Mature: 398

Protein sequence:

>399_residues
MTEDYSIRVAQSFTDIDPESWNQLSGVSRNTSEKYYNPFISHAFLSSMEDSGSATAKTGWLGHHLLLEDAVGMLVGAVPA
YLKNHSQGEYVFDHGWADAFERAGGHYYPKLQCSVPFTPATGPRLLVSEAVDATRFKPLLASGLAQVTEKIGVSSAHVTF
LEEDDLSALLPRDFLHRKDQQFHFINHGYRDHDDFLDALSSRKRKGLKKERRAALEHGIEIDWLTGSDLTEDIWDQFFAF
YMDTGSRKWGRPYLTRKFYSLIGERMADDVLLVMAKREGRYIAGAINFIGSDALYGRHWGCIEDHPFLHFEVCYHQAIDF
ALAKRLKRVEAGAQGEHKLARGYVPVTTHSAHFIAHPGLRRAIADYLQREREEVEHIGDYLDEHTPFRKGERQEHEPDA

Sequences:

>Translated_399_residues
MTEDYSIRVAQSFTDIDPESWNQLSGVSRNTSEKYYNPFISHAFLSSMEDSGSATAKTGWLGHHLLLEDAVGMLVGAVPA
YLKNHSQGEYVFDHGWADAFERAGGHYYPKLQCSVPFTPATGPRLLVSEAVDATRFKPLLASGLAQVTEKIGVSSAHVTF
LEEDDLSALLPRDFLHRKDQQFHFINHGYRDHDDFLDALSSRKRKGLKKERRAALEHGIEIDWLTGSDLTEDIWDQFFAF
YMDTGSRKWGRPYLTRKFYSLIGERMADDVLLVMAKREGRYIAGAINFIGSDALYGRHWGCIEDHPFLHFEVCYHQAIDF
ALAKRLKRVEAGAQGEHKLARGYVPVTTHSAHFIAHPGLRRAIADYLQREREEVEHIGDYLDEHTPFRKGERQEHEPDA
>Mature_398_residues
TEDYSIRVAQSFTDIDPESWNQLSGVSRNTSEKYYNPFISHAFLSSMEDSGSATAKTGWLGHHLLLEDAVGMLVGAVPAY
LKNHSQGEYVFDHGWADAFERAGGHYYPKLQCSVPFTPATGPRLLVSEAVDATRFKPLLASGLAQVTEKIGVSSAHVTFL
EEDDLSALLPRDFLHRKDQQFHFINHGYRDHDDFLDALSSRKRKGLKKERRAALEHGIEIDWLTGSDLTEDIWDQFFAFY
MDTGSRKWGRPYLTRKFYSLIGERMADDVLLVMAKREGRYIAGAINFIGSDALYGRHWGCIEDHPFLHFEVCYHQAIDFA
LAKRLKRVEAGAQGEHKLARGYVPVTTHSAHFIAHPGLRRAIADYLQREREEVEHIGDYLDEHTPFRKGERQEHEPDA

Specific function: Unknown

COG id: COG3146

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45429; Mature: 45298

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDYSIRVAQSFTDIDPESWNQLSGVSRNTSEKYYNPFISHAFLSSMEDSGSATAKTGW
CCCCCEEEEEHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LGHHLLLEDAVGMLVGAVPAYLKNHSQGEYVFDHGWADAFERAGGHYYPKLQCSVPFTPA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCCCC
TGPRLLVSEAVDATRFKPLLASGLAQVTEKIGVSSAHVTFLEEDDLSALLPRDFLHRKDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHCCCC
QFHFINHGYRDHDDFLDALSSRKRKGLKKERRAALEHGIEIDWLTGSDLTEDIWDQFFAF
CEEHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
YMDTGSRKWGRPYLTRKFYSLIGERMADDVLLVMAKREGRYIAGAINFIGSDALYGRHWG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHCCCCCCCCCCC
CIEDHPFLHFEVCYHQAIDFALAKRLKRVEAGAQGEHKLARGYVPVTTHSAHFIAHPGLR
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCEEECCCHH
RAIADYLQREREEVEHIGDYLDEHTPFRKGERQEHEPDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TEDYSIRVAQSFTDIDPESWNQLSGVSRNTSEKYYNPFISHAFLSSMEDSGSATAKTGW
CCCCEEEEEHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LGHHLLLEDAVGMLVGAVPAYLKNHSQGEYVFDHGWADAFERAGGHYYPKLQCSVPFTPA
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHCCCCCCCEEEEECCCCCC
TGPRLLVSEAVDATRFKPLLASGLAQVTEKIGVSSAHVTFLEEDDLSALLPRDFLHRKDQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHCCHHHHHCCCC
QFHFINHGYRDHDDFLDALSSRKRKGLKKERRAALEHGIEIDWLTGSDLTEDIWDQFFAF
CEEHHCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHH
YMDTGSRKWGRPYLTRKFYSLIGERMADDVLLVMAKREGRYIAGAINFIGSDALYGRHWG
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHCCCCCCCCCCC
CIEDHPFLHFEVCYHQAIDFALAKRLKRVEAGAQGEHKLARGYVPVTTHSAHFIAHPGLR
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEECCCCEEECCCHH
RAIADYLQREREEVEHIGDYLDEHTPFRKGERQEHEPDA
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA