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The map label for this gene is ycjF [C]

Identifier: 15888682

GI number: 15888682

Start: 1349195

End: 1350274

Strand: Reverse

Name: ycjF [C]

Synonym: Atu1356

Alternate gene names: 15888682

Gene position: 1350274-1349195 (Counterclockwise)

Preceding gene: 159184728

Following gene: 15888681

Centisome position: 47.52

GC content: 64.26

Gene sequence:

>1080_bases
ATGAAGGCTCCCACACAAAACGATCCGCAGACACGCCGCCCGGCGGCTTTCACGCTCGAGACCGAGGAGGCGGCACGGCC
GTCCGCCACACAGAAACGCGCGCCCCGCAGCTTCGACGCCGAGATTTCGCTGACGCCGGACGAGGATGACCCGTTTCTGG
CGCCTGCGGATATCGACGCCGCCGCATTACCGGTGGCGACGCCGAAGAAAAGCCGCTTCTCCTTCGGCAAGCTGGGGCTC
GGGGCGCTTGGTGTCCTTTTCTCGCTCGCCTTCGGGCTCTGGGCGGATCAGCTCATCCGCAATCTGTTTTCCCGCTCCGA
CTGGCTGGGTTACACCGCAACGATCGCCCTTATCGTGGCGCTTTTCGCGGTTCTCGCCCTTGTCGGCCGCGAGGTCTTCG
GCATCATGCGGCTCAACGCCGTGCAGTCTCTCAAGGCCGACGCTGAAACGGCCAGCCTCGACAAGAGCCCAAAACCCGCG
CGCGCCATCGTCACCCGCCTGAATGCAGTTCTCTCGCACCGGGCCGAAACGGCAAAAGGGCGCGCGGCGCTGAAGGAAAC
GGAAAATGACGTCATCGACGGTCCGCATCTGATCGAGCTTGCCGAACGAGAATTGCTCGTGCCGCTCGACAGGCAGGCCC
GTGCCCTCATTCTCAACTCCTCCAAGCGCGTGTCCGTCGTCACCGCCGTCAGCCCGCGCGCCGTGGTCGATCTCGCTTAT
GTGCTGTTCGAGGTGACGCGGCTGGTGCGCGCCATGGCGGAGCTTTATGGCGGCCGCCCGGGCACGCTTGGCATGCTGAA
GCTCCTGCGCGATGTCGTCGCGCATCTTGCCGTCACAGGCTCGATTGCCGTGGGTGACGGACTTGCCCAGCAGGTTCTCG
GTCATGGCCTCGCCTCGAAACTCTCCGCCCGTCTCGGCGAAGGCGTCATCAACGGGCTGATGACGGCGCGAATCGGCATT
GCCGCCATGGATCTTTGCCGCCCGCTGCCGTTCAGGGCGGTAAAGCGGCCAGGCATCGGTGATTTCATGTCCGACCTCAC
GCCCGATTTAAGCGGCGGAAAAAACGGTGAAAAAGCCTGA

Upstream 100 bases:

>100_bases
CGCCCAATATCGACGAGCCGGGCAGCGGCGGCATTCGGCTTTCCGTTCCCCATATCAGGCTCGACCGCGCCATGCAGTTC
CTGTTCGGAGACAAGCTCGC

Downstream 100 bases:

>100_bases
TCTGCCGGGCATTGCCGCTTCAAAAGGTTACGGACGAAGCTGCAAATGAGCGCGAAATAAACCAAGCATTAACCATTCCG
CCGGTAGATTGCAGCCTATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MKAPTQNDPQTRRPAAFTLETEEAARPSATQKRAPRSFDAEISLTPDEDDPFLAPADIDAAALPVATPKKSRFSFGKLGL
GALGVLFSLAFGLWADQLIRNLFSRSDWLGYTATIALIVALFAVLALVGREVFGIMRLNAVQSLKADAETASLDKSPKPA
RAIVTRLNAVLSHRAETAKGRAALKETENDVIDGPHLIELAERELLVPLDRQARALILNSSKRVSVVTAVSPRAVVDLAY
VLFEVTRLVRAMAELYGGRPGTLGMLKLLRDVVAHLAVTGSIAVGDGLAQQVLGHGLASKLSARLGEGVINGLMTARIGI
AAMDLCRPLPFRAVKRPGIGDFMSDLTPDLSGGKNGEKA

Sequences:

>Translated_359_residues
MKAPTQNDPQTRRPAAFTLETEEAARPSATQKRAPRSFDAEISLTPDEDDPFLAPADIDAAALPVATPKKSRFSFGKLGL
GALGVLFSLAFGLWADQLIRNLFSRSDWLGYTATIALIVALFAVLALVGREVFGIMRLNAVQSLKADAETASLDKSPKPA
RAIVTRLNAVLSHRAETAKGRAALKETENDVIDGPHLIELAERELLVPLDRQARALILNSSKRVSVVTAVSPRAVVDLAY
VLFEVTRLVRAMAELYGGRPGTLGMLKLLRDVVAHLAVTGSIAVGDGLAQQVLGHGLASKLSARLGEGVINGLMTARIGI
AAMDLCRPLPFRAVKRPGIGDFMSDLTPDLSGGKNGEKA
>Mature_359_residues
MKAPTQNDPQTRRPAAFTLETEEAARPSATQKRAPRSFDAEISLTPDEDDPFLAPADIDAAALPVATPKKSRFSFGKLGL
GALGVLFSLAFGLWADQLIRNLFSRSDWLGYTATIALIVALFAVLALVGREVFGIMRLNAVQSLKADAETASLDKSPKPA
RAIVTRLNAVLSHRAETAKGRAALKETENDVIDGPHLIELAERELLVPLDRQARALILNSSKRVSVVTAVSPRAVVDLAY
VLFEVTRLVRAMAELYGGRPGTLGMLKLLRDVVAHLAVTGSIAVGDGLAQQVLGHGLASKLSARLGEGVINGLMTARIGI
AAMDLCRPLPFRAVKRPGIGDFMSDLTPDLSGGKNGEKA

Specific function: Unknown

COG id: COG3768

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0283 family

Homologues:

Organism=Escherichia coli, GI1787582, Length=323, Percent_Identity=29.7213622291022, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1356_AGRT5 (Q8UFP1)

Other databases:

- EMBL:   AE007869
- PIR:   AD2743
- PIR:   C97524
- RefSeq:   NP_354363.1
- STRING:   Q8UFP1
- GeneID:   1133394
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu1356
- eggNOG:   COG3768
- HOGENOM:   HBG466177
- OMA:   VAAMEVC
- ProtClustDB:   PRK05415
- BioCyc:   ATUM176299-1:ATU1356-MONOMER
- HAMAP:   MF_01085
- InterPro:   IPR021147
- InterPro:   IPR006507
- TIGRFAMs:   TIGR01620

Pfam domain/function: PF05128 DUF697

EC number: NA

Molecular weight: Translated: 38242; Mature: 38242

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xe9dd58c)-; HASH(0xe7a6b40)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPTQNDPQTRRPAAFTLETEEAARPSATQKRAPRSFDAEISLTPDEDDPFLAPADIDA
CCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCCCCEEEECCCCCCCEECCCCCCC
AALPVATPKKSRFSFGKLGLGALGVLFSLAFGLWADQLIRNLFSRSDWLGYTATIALIVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFAVLALVGREVFGIMRLNAVQSLKADAETASLDKSPKPARAIVTRLNAVLSHRAETAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAALKETENDVIDGPHLIELAERELLVPLDRQARALILNSSKRVSVVTAVSPRAVVDLAY
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHH
VLFEVTRLVRAMAELYGGRPGTLGMLKLLRDVVAHLAVTGSIAVGDGLAQQVLGHGLASK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
LSARLGEGVINGLMTARIGIAAMDLCRPLPFRAVKRPGIGDFMSDLTPDLSGGKNGEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCH
>Mature Secondary Structure
MKAPTQNDPQTRRPAAFTLETEEAARPSATQKRAPRSFDAEISLTPDEDDPFLAPADIDA
CCCCCCCCCCCCCCCEEEEECHHHCCCCHHHHCCCCCCCCEEEECCCCCCCEECCCCCCC
AALPVATPKKSRFSFGKLGLGALGVLFSLAFGLWADQLIRNLFSRSDWLGYTATIALIVA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
LFAVLALVGREVFGIMRLNAVQSLKADAETASLDKSPKPARAIVTRLNAVLSHRAETAKG
HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
RAALKETENDVIDGPHLIELAERELLVPLDRQARALILNSSKRVSVVTAVSPRAVVDLAY
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEECCCCCEEEEEECCCHHHHHHHH
VLFEVTRLVRAMAELYGGRPGTLGMLKLLRDVVAHLAVTGSIAVGDGLAQQVLGHGLASK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHCHHHHHHHHHHHHHHH
LSARLGEGVINGLMTARIGIAAMDLCRPLPFRAVKRPGIGDFMSDLTPDLSGGKNGEKA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHCCCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194