Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888681
Identifier: 15888681
GI number: 15888681
Start: 1348505
End: 1349065
Strand: Reverse
Name: 15888681
Synonym: Atu1355
Alternate gene names: NA
Gene position: 1349065-1348505 (Counterclockwise)
Preceding gene: 15888682
Following gene: 15888677
Centisome position: 47.48
GC content: 61.14
Gene sequence:
>561_bases ATGTATTCGCGCTTCTTTTCGCTTATGGGCGGACTCGCCGCCATTTTGTCCGTCAGCGGCGGTTTCGGCATGTCTGACGT CCATGCAGCATCGCGCGATCGCGACGACGTCTTCTTCCGTTCGGTGGCCGGCAGCTGGAAAGGCCCCGGCGAAATCGTCG CCGGCAAATACAAGGGCACAAAATTCACCTGCGATCTGACGGGCGAACCGCTCGACGATAAGCAGACCGGCATCAAGCTC GGCGGCACCTGCCGCGTTGGCGTCTTCAGCCAGCCCATGTCGGCTGTCATCAGCCAGAAAGGCAACAGCTACGAGGGCAA GTTCCTCGACGGCGCTGCCGGCAAGGGCCTCGACATCACCACCGGTCAGGTGAGCGGCGACAAGGTGGTCGTCGGTATCA ACCGCGCCAAGCTCAACGGCGCCATGGTTGCCCGCGTCTCGAACGACAATTCGATGAACATCACCATTTCGGTCAAGGTC GCAGACCAGATGATCCCTGTCATCGGCGTCACGCTGGCGCGCGATATCGACCAGATCGCCGTCGGCTCGATCAAGCCGTA A
Upstream 100 bases:
>100_bases ACGGACGAAGCTGCAAATGAGCGCGAAATAAACCAAGCATTAACCATTCCGCCGGTAGATTGCAGCCTATCGAACAGGCT TCTTCGCCGGGGAAAGTATC
Downstream 100 bases:
>100_bases AAGCCATAATCTTCTCAGTCATCGCCGAGCGGGAGTGTCCACCACTCCCGCTTTTCGTTTGCGCGGACAATGCCACTCCT GTCCGCCTGCTGGAGCCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MYSRFFSLMGGLAAILSVSGGFGMSDVHAASRDRDDVFFRSVAGSWKGPGEIVAGKYKGTKFTCDLTGEPLDDKQTGIKL GGTCRVGVFSQPMSAVISQKGNSYEGKFLDGAAGKGLDITTGQVSGDKVVVGINRAKLNGAMVARVSNDNSMNITISVKV ADQMIPVIGVTLARDIDQIAVGSIKP
Sequences:
>Translated_186_residues MYSRFFSLMGGLAAILSVSGGFGMSDVHAASRDRDDVFFRSVAGSWKGPGEIVAGKYKGTKFTCDLTGEPLDDKQTGIKL GGTCRVGVFSQPMSAVISQKGNSYEGKFLDGAAGKGLDITTGQVSGDKVVVGINRAKLNGAMVARVSNDNSMNITISVKV ADQMIPVIGVTLARDIDQIAVGSIKP >Mature_186_residues MYSRFFSLMGGLAAILSVSGGFGMSDVHAASRDRDDVFFRSVAGSWKGPGEIVAGKYKGTKFTCDLTGEPLDDKQTGIKL GGTCRVGVFSQPMSAVISQKGNSYEGKFLDGAAGKGLDITTGQVSGDKVVVGINRAKLNGAMVARVSNDNSMNITISVKV ADQMIPVIGVTLARDIDQIAVGSIKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19413; Mature: 19413
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSRFFSLMGGLAAILSVSGGFGMSDVHAASRDRDDVFFRSVAGSWKGPGEIVAGKYKGT CHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCC KFTCDLTGEPLDDKQTGIKLGGTCRVGVFSQPMSAVISQKGNSYEGKFLDGAAGKGLDIT EEEEEECCCCCCCCCCCEEECCEEEEEECCCHHHHHHHCCCCCCCCEEECCCCCCCCEEE TGQVSGDKVVVGINRAKLNGAMVARVSNDNSMNITISVKVADQMIPVIGVTLARDIDQIA ECCCCCCEEEEEECEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHCHHHHC VGSIKP CCCCCC >Mature Secondary Structure MYSRFFSLMGGLAAILSVSGGFGMSDVHAASRDRDDVFFRSVAGSWKGPGEIVAGKYKGT CHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHCCCCCCCCCEEEEEECCC KFTCDLTGEPLDDKQTGIKLGGTCRVGVFSQPMSAVISQKGNSYEGKFLDGAAGKGLDIT EEEEEECCCCCCCCCCCEEECCEEEEEECCCHHHHHHHCCCCCCCCEEECCCCCCCCEEE TGQVSGDKVVVGINRAKLNGAMVARVSNDNSMNITISVKVADQMIPVIGVTLARDIDQIA ECCCCCCEEEEEECEEECCCEEEEEECCCCCEEEEEEEEECCHHHHHHHHHHHHCHHHHC VGSIKP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA