Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888566

Identifier: 15888566

GI number: 15888566

Start: 1223075

End: 1224316

Strand: Reverse

Name: 15888566

Synonym: Atu1235

Alternate gene names: NA

Gene position: 1224316-1223075 (Counterclockwise)

Preceding gene: 159184679

Following gene: 15888565

Centisome position: 43.09

GC content: 58.45

Gene sequence:

>1242_bases
TTGACCCATACCGGTTACCAGCACACGGCGGATTTTGACGCACCCTTAGCCACCATGCGGCTCATCGGCGCGTTCTTCAT
CGCATTTGGGGTGTTTCTCTCCGGTTTCGTCATTTCCGAACCGGCGCCTTACGAATTGATGATGGTGGGACAGGTGGCCT
TGTGGTTCCTGCTCGGCCTTCGCCTTTCGCGCACCATCGTCCTGCTTTTATGCCTGCTGCTTGCCTTCAACGTCGGCGGT
TATCTTTCGCTCACCACGATGGCCGATCTGGATGAGGGACCGCTCTATCTCGCCGTGTCGACCTTTCTGGCGCTGACCTC
GGTGTTTTATGCGGCGATCGTGGAGGACAAATACCAGCGGCTACTGTTGATTTTCCGGGCCTGGCTGACGGCGGCGCTCA
TCACCGCGCTGCTTGGCATCATCGGTTATTTCCATGCCATTCCGGGCTTTGAGGTCTTCACCCTTTACGATCGTGCCAAA
GGTGCCTTTCAGGACCCCAACGTCTTTGGTCCCTTTCTGGTGACACCGTCGCTTTACCTCATCTATGGGCTTCTCACCGG
CAAGGCGATGCATGCGCCCTGGCGCATCCTTGGGCTGCTCATTCTCGCGCTTGGCATATTCCTGTCGTTTTCACGCGCGG
CCTGGGGCCTTTTTCTGTTCGCCACCATTCTCCTCGTCTTCGTCATGCTCCTGAAGGAGCGGACGGCGGCATTTCGCCTG
AAAATCCTCGTGCTGTTCCTCGTCGCGGCTGGCCTTATGGTCGCGGCTGTCATCATCGCGCTGCAGTTCAAGCAGGTGGC
GGATCTGTTCTCCAGCCGTGCCTCGGCGGTGCAATCTTATGATGGTGGGCATCTCGGGCGTTTTGCCCGCCACTATCTCG
GCTTCCTGCTTGCCATGGAACATCCGCTCGGCATCGGCCCGATGGTGTTCGACGATATCTTTCCCGCCGCCGAACATAAT
ATCTGGCTGAAAAGCCTGACTACCCATGGCTGGTTTGGTTTCGTCATCTATCTCACCCTCATCTGCTGGACGATCGCCGC
CGGTTTCCGACATCTGCTGCGGCCACGCCCCTGGCAGTCGTTCCTGATCATTTCCTGGGTGACCTTCGTCGGGCATGTGA
TGATCGGCGCCGTCATCGATACCGACCACTGGCGGCATTTCTTCCTGCTGCTCGGCATATTGTGGGGATGCATGGCGCTG
GAAAAACGTGAAAGCCTGCGCCGCCGCCCGCGCGCCGCATAA

Upstream 100 bases:

>100_bases
CCGAATATGATCTCTATTACATCGAGAACTGGTCGCTGTTTCTCGATCTGAAGATCCTGTTCCTCACGCCGATCCGGCTG
CTGAAATCGGAAAATGCCTA

Downstream 100 bases:

>100_bases
AGTCCTTCCCTTACGGAACCTTACACCATTTCATGCGTTTAGCCCCCGATTCTGATCGTCAAACGGGGAGACATCTTATG
ACGCAGACCAATAATCTCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 413; Mature: 412

Protein sequence:

>413_residues
MTHTGYQHTADFDAPLATMRLIGAFFIAFGVFLSGFVISEPAPYELMMVGQVALWFLLGLRLSRTIVLLLCLLLAFNVGG
YLSLTTMADLDEGPLYLAVSTFLALTSVFYAAIVEDKYQRLLLIFRAWLTAALITALLGIIGYFHAIPGFEVFTLYDRAK
GAFQDPNVFGPFLVTPSLYLIYGLLTGKAMHAPWRILGLLILALGIFLSFSRAAWGLFLFATILLVFVMLLKERTAAFRL
KILVLFLVAAGLMVAAVIIALQFKQVADLFSSRASAVQSYDGGHLGRFARHYLGFLLAMEHPLGIGPMVFDDIFPAAEHN
IWLKSLTTHGWFGFVIYLTLICWTIAAGFRHLLRPRPWQSFLIISWVTFVGHVMIGAVIDTDHWRHFFLLLGILWGCMAL
EKRESLRRRPRAA

Sequences:

>Translated_413_residues
MTHTGYQHTADFDAPLATMRLIGAFFIAFGVFLSGFVISEPAPYELMMVGQVALWFLLGLRLSRTIVLLLCLLLAFNVGG
YLSLTTMADLDEGPLYLAVSTFLALTSVFYAAIVEDKYQRLLLIFRAWLTAALITALLGIIGYFHAIPGFEVFTLYDRAK
GAFQDPNVFGPFLVTPSLYLIYGLLTGKAMHAPWRILGLLILALGIFLSFSRAAWGLFLFATILLVFVMLLKERTAAFRL
KILVLFLVAAGLMVAAVIIALQFKQVADLFSSRASAVQSYDGGHLGRFARHYLGFLLAMEHPLGIGPMVFDDIFPAAEHN
IWLKSLTTHGWFGFVIYLTLICWTIAAGFRHLLRPRPWQSFLIISWVTFVGHVMIGAVIDTDHWRHFFLLLGILWGCMAL
EKRESLRRRPRAA
>Mature_412_residues
THTGYQHTADFDAPLATMRLIGAFFIAFGVFLSGFVISEPAPYELMMVGQVALWFLLGLRLSRTIVLLLCLLLAFNVGGY
LSLTTMADLDEGPLYLAVSTFLALTSVFYAAIVEDKYQRLLLIFRAWLTAALITALLGIIGYFHAIPGFEVFTLYDRAKG
AFQDPNVFGPFLVTPSLYLIYGLLTGKAMHAPWRILGLLILALGIFLSFSRAAWGLFLFATILLVFVMLLKERTAAFRLK
ILVLFLVAAGLMVAAVIIALQFKQVADLFSSRASAVQSYDGGHLGRFARHYLGFLLAMEHPLGIGPMVFDDIFPAAEHNI
WLKSLTTHGWFGFVIYLTLICWTIAAGFRHLLRPRPWQSFLIISWVTFVGHVMIGAVIDTDHWRHFFLLLGILWGCMALE
KRESLRRRPRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46237; Mature: 46106

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHTGYQHTADFDAPLATMRLIGAFFIAFGVFLSGFVISEPAPYELMMVGQVALWFLLGL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHH
RLSRTIVLLLCLLLAFNVGGYLSLTTMADLDEGPLYLAVSTFLALTSVFYAAIVEDKYQR
HHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLIFRAWLTAALITALLGIIGYFHAIPGFEVFTLYDRAKGAFQDPNVFGPFLVTPSLYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
IYGLLTGKAMHAPWRILGLLILALGIFLSFSRAAWGLFLFATILLVFVMLLKERTAAFRL
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILVLFLVAAGLMVAAVIIALQFKQVADLFSSRASAVQSYDGGHLGRFARHYLGFLLAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
HPLGIGPMVFDDIFPAAEHNIWLKSLTTHGWFGFVIYLTLICWTIAAGFRHLLRPRPWQS
CCCCCCHHHHHHHCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLIISWVTFVGHVMIGAVIDTDHWRHFFLLLGILWGCMALEKRESLRRRPRAA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
THTGYQHTADFDAPLATMRLIGAFFIAFGVFLSGFVISEPAPYELMMVGQVALWFLLGL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHH
RLSRTIVLLLCLLLAFNVGGYLSLTTMADLDEGPLYLAVSTFLALTSVFYAAIVEDKYQR
HHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLIFRAWLTAALITALLGIIGYFHAIPGFEVFTLYDRAKGAFQDPNVFGPFLVTPSLYL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHCCCCCCCCCCCCCHHHHHHHHH
IYGLLTGKAMHAPWRILGLLILALGIFLSFSRAAWGLFLFATILLVFVMLLKERTAAFRL
HHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILVLFLVAAGLMVAAVIIALQFKQVADLFSSRASAVQSYDGGHLGRFARHYLGFLLAME
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
HPLGIGPMVFDDIFPAAEHNIWLKSLTTHGWFGFVIYLTLICWTIAAGFRHLLRPRPWQS
CCCCCCHHHHHHHCCCHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
FLIISWVTFVGHVMIGAVIDTDHWRHFFLLLGILWGCMALEKRESLRRRPRAA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA